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Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for par...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458438/ https://www.ncbi.nlm.nih.gov/pubmed/35904809 http://dx.doi.org/10.1093/nar/gkac651 |
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author | Guo, Lijuan Zhao, Yilin Zhang, Qian Feng, Ying Bi, Lulu Zhang, Xia Wang, Teng Liu, Cong Ma, Hanhui Sun, Bo |
author_facet | Guo, Lijuan Zhao, Yilin Zhang, Qian Feng, Ying Bi, Lulu Zhang, Xia Wang, Teng Liu, Cong Ma, Hanhui Sun, Bo |
author_sort | Guo, Lijuan |
collection | PubMed |
description | The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for partitioning remains poorly understood. Here, using a single-molecule approach, we show that tens of Bacillus subtilis ParB (Spo0J) proteins can stochastically multimerize on and stably bind to nonspecific DNA. The introduction of CTP promotes the formation and diffusion of the multimeric ParB along DNA, offering an opportunity for ParB proteins to further forgather and cluster. Intriguingly, ParB multimers can recognize parS motifs and are more inclined to remain immobile on them. Importantly, the ParB multimer features distinct capabilities of not only bridging two independent DNA molecules but also mediating their transportation, both of which are enhanced by the presence of either CTP or parS in the DNA. These findings shed new light on ParB dynamics in self-multimerization and DNA organization and help to better comprehend the assembly of the ParB-DNA partition complex. |
format | Online Article Text |
id | pubmed-9458438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-94584382022-09-09 Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis Guo, Lijuan Zhao, Yilin Zhang, Qian Feng, Ying Bi, Lulu Zhang, Xia Wang, Teng Liu, Cong Ma, Hanhui Sun, Bo Nucleic Acids Res Molecular Biology The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for partitioning remains poorly understood. Here, using a single-molecule approach, we show that tens of Bacillus subtilis ParB (Spo0J) proteins can stochastically multimerize on and stably bind to nonspecific DNA. The introduction of CTP promotes the formation and diffusion of the multimeric ParB along DNA, offering an opportunity for ParB proteins to further forgather and cluster. Intriguingly, ParB multimers can recognize parS motifs and are more inclined to remain immobile on them. Importantly, the ParB multimer features distinct capabilities of not only bridging two independent DNA molecules but also mediating their transportation, both of which are enhanced by the presence of either CTP or parS in the DNA. These findings shed new light on ParB dynamics in self-multimerization and DNA organization and help to better comprehend the assembly of the ParB-DNA partition complex. Oxford University Press 2022-07-29 /pmc/articles/PMC9458438/ /pubmed/35904809 http://dx.doi.org/10.1093/nar/gkac651 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Molecular Biology Guo, Lijuan Zhao, Yilin Zhang, Qian Feng, Ying Bi, Lulu Zhang, Xia Wang, Teng Liu, Cong Ma, Hanhui Sun, Bo Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title | Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title_full | Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title_fullStr | Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title_full_unstemmed | Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title_short | Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis |
title_sort | stochastically multimerized parb orchestrates dna assembly as unveiled by single-molecule analysis |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458438/ https://www.ncbi.nlm.nih.gov/pubmed/35904809 http://dx.doi.org/10.1093/nar/gkac651 |
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