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Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis

The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for par...

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Autores principales: Guo, Lijuan, Zhao, Yilin, Zhang, Qian, Feng, Ying, Bi, Lulu, Zhang, Xia, Wang, Teng, Liu, Cong, Ma, Hanhui, Sun, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458438/
https://www.ncbi.nlm.nih.gov/pubmed/35904809
http://dx.doi.org/10.1093/nar/gkac651
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author Guo, Lijuan
Zhao, Yilin
Zhang, Qian
Feng, Ying
Bi, Lulu
Zhang, Xia
Wang, Teng
Liu, Cong
Ma, Hanhui
Sun, Bo
author_facet Guo, Lijuan
Zhao, Yilin
Zhang, Qian
Feng, Ying
Bi, Lulu
Zhang, Xia
Wang, Teng
Liu, Cong
Ma, Hanhui
Sun, Bo
author_sort Guo, Lijuan
collection PubMed
description The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for partitioning remains poorly understood. Here, using a single-molecule approach, we show that tens of Bacillus subtilis ParB (Spo0J) proteins can stochastically multimerize on and stably bind to nonspecific DNA. The introduction of CTP promotes the formation and diffusion of the multimeric ParB along DNA, offering an opportunity for ParB proteins to further forgather and cluster. Intriguingly, ParB multimers can recognize parS motifs and are more inclined to remain immobile on them. Importantly, the ParB multimer features distinct capabilities of not only bridging two independent DNA molecules but also mediating their transportation, both of which are enhanced by the presence of either CTP or parS in the DNA. These findings shed new light on ParB dynamics in self-multimerization and DNA organization and help to better comprehend the assembly of the ParB-DNA partition complex.
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spelling pubmed-94584382022-09-09 Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis Guo, Lijuan Zhao, Yilin Zhang, Qian Feng, Ying Bi, Lulu Zhang, Xia Wang, Teng Liu, Cong Ma, Hanhui Sun, Bo Nucleic Acids Res Molecular Biology The tripartite ParABS system mediates chromosome segregation in a wide range of bacteria. Dimeric ParB was proposed to nucleate on parS sites and spread to neighboring DNA. However, how properly distributed ParB dimers further compact chromosomal DNA into a higher-order nucleoprotein complex for partitioning remains poorly understood. Here, using a single-molecule approach, we show that tens of Bacillus subtilis ParB (Spo0J) proteins can stochastically multimerize on and stably bind to nonspecific DNA. The introduction of CTP promotes the formation and diffusion of the multimeric ParB along DNA, offering an opportunity for ParB proteins to further forgather and cluster. Intriguingly, ParB multimers can recognize parS motifs and are more inclined to remain immobile on them. Importantly, the ParB multimer features distinct capabilities of not only bridging two independent DNA molecules but also mediating their transportation, both of which are enhanced by the presence of either CTP or parS in the DNA. These findings shed new light on ParB dynamics in self-multimerization and DNA organization and help to better comprehend the assembly of the ParB-DNA partition complex. Oxford University Press 2022-07-29 /pmc/articles/PMC9458438/ /pubmed/35904809 http://dx.doi.org/10.1093/nar/gkac651 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Molecular Biology
Guo, Lijuan
Zhao, Yilin
Zhang, Qian
Feng, Ying
Bi, Lulu
Zhang, Xia
Wang, Teng
Liu, Cong
Ma, Hanhui
Sun, Bo
Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title_full Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title_fullStr Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title_full_unstemmed Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title_short Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis
title_sort stochastically multimerized parb orchestrates dna assembly as unveiled by single-molecule analysis
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458438/
https://www.ncbi.nlm.nih.gov/pubmed/35904809
http://dx.doi.org/10.1093/nar/gkac651
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