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Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review

BACKGROUND: Transplant nephropathology is a highly specialized field of pathology comprising both the evaluation of organ donor biopsy for organ allocation and post-transplant graft biopsy for assessment of rejection or graft damage. The introduction of digital pathology with whole-slide imaging (WS...

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Autores principales: Girolami, Ilaria, Pantanowitz, Liron, Marletta, Stefano, Hermsen, Meyke, van der Laak, Jeroen, Munari, Enrico, Furian, Lucrezia, Vistoli, Fabio, Zaza, Gianluigi, Cardillo, Massimo, Gesualdo, Loreto, Gambaro, Giovanni, Eccher, Albino
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458558/
https://www.ncbi.nlm.nih.gov/pubmed/35441256
http://dx.doi.org/10.1007/s40620-022-01327-8
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author Girolami, Ilaria
Pantanowitz, Liron
Marletta, Stefano
Hermsen, Meyke
van der Laak, Jeroen
Munari, Enrico
Furian, Lucrezia
Vistoli, Fabio
Zaza, Gianluigi
Cardillo, Massimo
Gesualdo, Loreto
Gambaro, Giovanni
Eccher, Albino
author_facet Girolami, Ilaria
Pantanowitz, Liron
Marletta, Stefano
Hermsen, Meyke
van der Laak, Jeroen
Munari, Enrico
Furian, Lucrezia
Vistoli, Fabio
Zaza, Gianluigi
Cardillo, Massimo
Gesualdo, Loreto
Gambaro, Giovanni
Eccher, Albino
author_sort Girolami, Ilaria
collection PubMed
description BACKGROUND: Transplant nephropathology is a highly specialized field of pathology comprising both the evaluation of organ donor biopsy for organ allocation and post-transplant graft biopsy for assessment of rejection or graft damage. The introduction of digital pathology with whole-slide imaging (WSI) in clinical research, trials and practice has catalyzed the application of artificial intelligence (AI) for histopathology, with development of novel machine-learning models for tissue interrogation and discovery. We aimed to review the literature for studies specifically applying AI algorithms to WSI-digitized pre-implantation kidney biopsy. METHODS: A systematic search was carried out in the electronic databases PubMed-MEDLINE and Embase until 25th September, 2021 with a combination of the key terms “kidney”, “biopsy”, “transplantation” and “artificial intelligence” and their aliases. Studies dealing with the application of AI algorithms coupled with WSI in pre-implantation kidney biopsies were included. The main theme addressed was detection and quantification of tissue components. Extracted data were: author, year and country of the study, type of biopsy features investigated, number of cases, type of algorithm deployed, main results of the study in terms of diagnostic outcome, and the main limitations of the study. RESULTS: Of 5761 retrieved articles, 7 met our inclusion criteria. All studies focused largely on AI-based detection and classification of glomerular structures and to a lesser extent on tubular and vascular structures. Performance of AI algorithms was excellent and promising. CONCLUSION: All studies highlighted the importance of expert pathologist annotation to reliably train models and the need to acknowledge clinical nuances of the pre-implantation setting. Close cooperation between computer scientists and practicing as well as expert renal pathologists is needed, helping to refine the performance of AI-based models for routine pre-implantation kidney biopsy clinical practice. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s40620-022-01327-8.
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spelling pubmed-94585582022-09-10 Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review Girolami, Ilaria Pantanowitz, Liron Marletta, Stefano Hermsen, Meyke van der Laak, Jeroen Munari, Enrico Furian, Lucrezia Vistoli, Fabio Zaza, Gianluigi Cardillo, Massimo Gesualdo, Loreto Gambaro, Giovanni Eccher, Albino J Nephrol Systematic Reviews BACKGROUND: Transplant nephropathology is a highly specialized field of pathology comprising both the evaluation of organ donor biopsy for organ allocation and post-transplant graft biopsy for assessment of rejection or graft damage. The introduction of digital pathology with whole-slide imaging (WSI) in clinical research, trials and practice has catalyzed the application of artificial intelligence (AI) for histopathology, with development of novel machine-learning models for tissue interrogation and discovery. We aimed to review the literature for studies specifically applying AI algorithms to WSI-digitized pre-implantation kidney biopsy. METHODS: A systematic search was carried out in the electronic databases PubMed-MEDLINE and Embase until 25th September, 2021 with a combination of the key terms “kidney”, “biopsy”, “transplantation” and “artificial intelligence” and their aliases. Studies dealing with the application of AI algorithms coupled with WSI in pre-implantation kidney biopsies were included. The main theme addressed was detection and quantification of tissue components. Extracted data were: author, year and country of the study, type of biopsy features investigated, number of cases, type of algorithm deployed, main results of the study in terms of diagnostic outcome, and the main limitations of the study. RESULTS: Of 5761 retrieved articles, 7 met our inclusion criteria. All studies focused largely on AI-based detection and classification of glomerular structures and to a lesser extent on tubular and vascular structures. Performance of AI algorithms was excellent and promising. CONCLUSION: All studies highlighted the importance of expert pathologist annotation to reliably train models and the need to acknowledge clinical nuances of the pre-implantation setting. Close cooperation between computer scientists and practicing as well as expert renal pathologists is needed, helping to refine the performance of AI-based models for routine pre-implantation kidney biopsy clinical practice. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s40620-022-01327-8. Springer International Publishing 2022-04-19 2022 /pmc/articles/PMC9458558/ /pubmed/35441256 http://dx.doi.org/10.1007/s40620-022-01327-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visithttp://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Systematic Reviews
Girolami, Ilaria
Pantanowitz, Liron
Marletta, Stefano
Hermsen, Meyke
van der Laak, Jeroen
Munari, Enrico
Furian, Lucrezia
Vistoli, Fabio
Zaza, Gianluigi
Cardillo, Massimo
Gesualdo, Loreto
Gambaro, Giovanni
Eccher, Albino
Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title_full Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title_fullStr Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title_full_unstemmed Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title_short Artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
title_sort artificial intelligence applications for pre-implantation kidney biopsy pathology practice: a systematic review
topic Systematic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458558/
https://www.ncbi.nlm.nih.gov/pubmed/35441256
http://dx.doi.org/10.1007/s40620-022-01327-8
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