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Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma

OBJECTIVES: To identify computed tomography (CT)-based radiomic signatures of cluster of differentiation 8 (CD8)-T cell infiltration and programmed cell death ligand 1 (PD-L1) expression levels in patients with clear-cell renal cell carcinoma (ccRCC). METHODS: Seventy-eight patients with pathologica...

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Autores principales: Varghese, Bino, Cen, Steven, Zahoor, Haris, Siddiqui, Imran, Aron, Manju, Sali, Akash, Rhie, Suhn, Lei, Xiaomeng, Rivas, Marielena, Liu, Derek, Hwang, Darryl, Quinn, David, Desai, Mihir, Vaishampayan, Ulka, Gill, Inderbir, Duddalwar, Vinay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460152/
https://www.ncbi.nlm.nih.gov/pubmed/36090617
http://dx.doi.org/10.1016/j.ejro.2022.100440
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author Varghese, Bino
Cen, Steven
Zahoor, Haris
Siddiqui, Imran
Aron, Manju
Sali, Akash
Rhie, Suhn
Lei, Xiaomeng
Rivas, Marielena
Liu, Derek
Hwang, Darryl
Quinn, David
Desai, Mihir
Vaishampayan, Ulka
Gill, Inderbir
Duddalwar, Vinay
author_facet Varghese, Bino
Cen, Steven
Zahoor, Haris
Siddiqui, Imran
Aron, Manju
Sali, Akash
Rhie, Suhn
Lei, Xiaomeng
Rivas, Marielena
Liu, Derek
Hwang, Darryl
Quinn, David
Desai, Mihir
Vaishampayan, Ulka
Gill, Inderbir
Duddalwar, Vinay
author_sort Varghese, Bino
collection PubMed
description OBJECTIVES: To identify computed tomography (CT)-based radiomic signatures of cluster of differentiation 8 (CD8)-T cell infiltration and programmed cell death ligand 1 (PD-L1) expression levels in patients with clear-cell renal cell carcinoma (ccRCC). METHODS: Seventy-eight patients with pathologically confirmed localized ccRCC, preoperative multiphase CT and tumor resection specimens were enrolled in this retrospective study. Regions of interest (ROI) of the ccRCC volume were manually segmented from the CT images and processed using a radiomics panel comprising of 1708 metrics. The extracted metrics were used as inputs to three machine learning classifiers: Random Forest, AdaBoost, and ElasticNet to create radiomic signatures for CD8-T cell infiltration and PD-L1 expression, respectively. RESULTS: Using a cut-off of 80 lymphocytes per high power field, 59 % were classified to CD8 highly infiltrated tumors and 41 % were CD8 non highly infiltrated tumors, respectively. An ElasticNet classifier discriminated between these two groups of CD8-T cells with an AUC of 0.68 (95 % CI, 0.55–0.80). In addition, based on tumor proportion score with a cut-off of > 1 % tumor cells expressing PD-L1, 76 % were PD-L1 positive and 24 % were PD-L1 negative. An Adaboost classifier discriminated between PD-L1 positive and PD-L1 negative tumors with an AUC of 0.8 95 % CI: (0.66, 0.95). 3D radiomics metrics of graylevel co-occurrence matrix (GLCM) and graylevel run-length matrix (GLRLM) metrics drove the performance for CD8-Tcell and PD-L1 classification, respectively. CONCLUSIONS: CT-radiomic signatures can differentiate tumors with high CD8-T cell infiltration with moderate accuracy and positive PD-L1 expression with good accuracy in ccRCC.
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spelling pubmed-94601522022-09-10 Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma Varghese, Bino Cen, Steven Zahoor, Haris Siddiqui, Imran Aron, Manju Sali, Akash Rhie, Suhn Lei, Xiaomeng Rivas, Marielena Liu, Derek Hwang, Darryl Quinn, David Desai, Mihir Vaishampayan, Ulka Gill, Inderbir Duddalwar, Vinay Eur J Radiol Open Article OBJECTIVES: To identify computed tomography (CT)-based radiomic signatures of cluster of differentiation 8 (CD8)-T cell infiltration and programmed cell death ligand 1 (PD-L1) expression levels in patients with clear-cell renal cell carcinoma (ccRCC). METHODS: Seventy-eight patients with pathologically confirmed localized ccRCC, preoperative multiphase CT and tumor resection specimens were enrolled in this retrospective study. Regions of interest (ROI) of the ccRCC volume were manually segmented from the CT images and processed using a radiomics panel comprising of 1708 metrics. The extracted metrics were used as inputs to three machine learning classifiers: Random Forest, AdaBoost, and ElasticNet to create radiomic signatures for CD8-T cell infiltration and PD-L1 expression, respectively. RESULTS: Using a cut-off of 80 lymphocytes per high power field, 59 % were classified to CD8 highly infiltrated tumors and 41 % were CD8 non highly infiltrated tumors, respectively. An ElasticNet classifier discriminated between these two groups of CD8-T cells with an AUC of 0.68 (95 % CI, 0.55–0.80). In addition, based on tumor proportion score with a cut-off of > 1 % tumor cells expressing PD-L1, 76 % were PD-L1 positive and 24 % were PD-L1 negative. An Adaboost classifier discriminated between PD-L1 positive and PD-L1 negative tumors with an AUC of 0.8 95 % CI: (0.66, 0.95). 3D radiomics metrics of graylevel co-occurrence matrix (GLCM) and graylevel run-length matrix (GLRLM) metrics drove the performance for CD8-Tcell and PD-L1 classification, respectively. CONCLUSIONS: CT-radiomic signatures can differentiate tumors with high CD8-T cell infiltration with moderate accuracy and positive PD-L1 expression with good accuracy in ccRCC. Elsevier 2022-09-02 /pmc/articles/PMC9460152/ /pubmed/36090617 http://dx.doi.org/10.1016/j.ejro.2022.100440 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Varghese, Bino
Cen, Steven
Zahoor, Haris
Siddiqui, Imran
Aron, Manju
Sali, Akash
Rhie, Suhn
Lei, Xiaomeng
Rivas, Marielena
Liu, Derek
Hwang, Darryl
Quinn, David
Desai, Mihir
Vaishampayan, Ulka
Gill, Inderbir
Duddalwar, Vinay
Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title_full Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title_fullStr Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title_full_unstemmed Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title_short Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
title_sort feasibility of using ct radiomic signatures for predicting cd8-t cell infiltration and pd-l1 expression in renal cell carcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460152/
https://www.ncbi.nlm.nih.gov/pubmed/36090617
http://dx.doi.org/10.1016/j.ejro.2022.100440
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