Cargando…

Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)

Nanomaterials with unique and diverse physico-chemical properties are used in plant science since they improve plant growth and development and offer protection against biotic and abiotic stressors. Previous studies have explored the effects of such nanomaterials on different plant mechanisms, but i...

Descripción completa

Detalles Bibliográficos
Autores principales: Haliloğlu, Kamil, Türkoğlu, Aras, Balpınar, Özge, Nadaroğlu, Hayrunnisa, Alaylı, Azize, Poczai, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460560/
https://www.ncbi.nlm.nih.gov/pubmed/36079574
http://dx.doi.org/10.3390/plants11172193
_version_ 1784786777027903488
author Haliloğlu, Kamil
Türkoğlu, Aras
Balpınar, Özge
Nadaroğlu, Hayrunnisa
Alaylı, Azize
Poczai, Peter
author_facet Haliloğlu, Kamil
Türkoğlu, Aras
Balpınar, Özge
Nadaroğlu, Hayrunnisa
Alaylı, Azize
Poczai, Peter
author_sort Haliloğlu, Kamil
collection PubMed
description Nanomaterials with unique and diverse physico-chemical properties are used in plant science since they improve plant growth and development and offer protection against biotic and abiotic stressors. Previous studies have explored the effects of such nanomaterials on different plant mechanisms, but information about the effects of nanomaterials on induced DNA methylation, genomic instability and LTR retrotransposon polymorphism in wheat is lacking. Therefore, the present study highlights the key role of nanoparticles in DNA methylation and polymorphism in wheat by investigating the effects of ZnO, CuO and γ-Fe(3)O(4) nanoparticles (NPs) on mature embryo cultures of wheat (Triticum aestivum L.). Nanoparticles were supplemented with Murashige and Skoog (MS) basal medium at normal (1X), double (2X) and triple (3X) concentrations. The findings revealed different responses to the polymorphism rate depending on the nanoparticle type and concentration. Genomic template stability (GTS) values were used to compare the changes encountered in iPBS profiles. ZnO, CuO and γ-Fe(3)O(4) NPs increased the polymorphism rate and cytosine methylation compared to the positive control while reducing GTS values. Moreover, non-γ-Fe(3)O(4) NPs treatments and 2X ZnO and CuO NP treatments yielded higher polymorphism percentages in both MspI- and HpaII-digested CRED-iPBS assays and were thus classified as hypermethylation when the average polymorphism percentage for MspI digestion was considered. On the other hand, the 3X concentrations of all nanoparticles decreased HpaII and MspI polymorphism percentages and were thus classified as hypomethylation. The findings revealed that MS medium supplemented with nanoparticles had epigenetic and genotoxic effects.
format Online
Article
Text
id pubmed-9460560
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-94605602022-09-10 Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.) Haliloğlu, Kamil Türkoğlu, Aras Balpınar, Özge Nadaroğlu, Hayrunnisa Alaylı, Azize Poczai, Peter Plants (Basel) Article Nanomaterials with unique and diverse physico-chemical properties are used in plant science since they improve plant growth and development and offer protection against biotic and abiotic stressors. Previous studies have explored the effects of such nanomaterials on different plant mechanisms, but information about the effects of nanomaterials on induced DNA methylation, genomic instability and LTR retrotransposon polymorphism in wheat is lacking. Therefore, the present study highlights the key role of nanoparticles in DNA methylation and polymorphism in wheat by investigating the effects of ZnO, CuO and γ-Fe(3)O(4) nanoparticles (NPs) on mature embryo cultures of wheat (Triticum aestivum L.). Nanoparticles were supplemented with Murashige and Skoog (MS) basal medium at normal (1X), double (2X) and triple (3X) concentrations. The findings revealed different responses to the polymorphism rate depending on the nanoparticle type and concentration. Genomic template stability (GTS) values were used to compare the changes encountered in iPBS profiles. ZnO, CuO and γ-Fe(3)O(4) NPs increased the polymorphism rate and cytosine methylation compared to the positive control while reducing GTS values. Moreover, non-γ-Fe(3)O(4) NPs treatments and 2X ZnO and CuO NP treatments yielded higher polymorphism percentages in both MspI- and HpaII-digested CRED-iPBS assays and were thus classified as hypermethylation when the average polymorphism percentage for MspI digestion was considered. On the other hand, the 3X concentrations of all nanoparticles decreased HpaII and MspI polymorphism percentages and were thus classified as hypomethylation. The findings revealed that MS medium supplemented with nanoparticles had epigenetic and genotoxic effects. MDPI 2022-08-24 /pmc/articles/PMC9460560/ /pubmed/36079574 http://dx.doi.org/10.3390/plants11172193 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Haliloğlu, Kamil
Türkoğlu, Aras
Balpınar, Özge
Nadaroğlu, Hayrunnisa
Alaylı, Azize
Poczai, Peter
Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title_full Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title_fullStr Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title_full_unstemmed Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title_short Effects of Zinc, Copper and Iron Oxide Nanoparticles on Induced DNA Methylation, Genomic Instability and LTR Retrotransposon Polymorphism in Wheat (Triticum aestivum L.)
title_sort effects of zinc, copper and iron oxide nanoparticles on induced dna methylation, genomic instability and ltr retrotransposon polymorphism in wheat (triticum aestivum l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460560/
https://www.ncbi.nlm.nih.gov/pubmed/36079574
http://dx.doi.org/10.3390/plants11172193
work_keys_str_mv AT haliloglukamil effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml
AT turkogluaras effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml
AT balpınarozge effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml
AT nadarogluhayrunnisa effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml
AT alaylıazize effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml
AT poczaipeter effectsofzinccopperandironoxidenanoparticlesoninduceddnamethylationgenomicinstabilityandltrretrotransposonpolymorphisminwheattriticumaestivuml