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Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray
Machine learning approaches are employed to analyze differences in real-time reverse transcription polymerase chain reaction scans to differentiate between COVID-19 and pneumonia. However, these methods suffer from large training data requirements, unreliable images, and uncertain clinical diagnosis...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460643/ https://www.ncbi.nlm.nih.gov/pubmed/36081170 http://dx.doi.org/10.3390/s22176709 |
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author | Kim, Young Jae |
author_facet | Kim, Young Jae |
author_sort | Kim, Young Jae |
collection | PubMed |
description | Machine learning approaches are employed to analyze differences in real-time reverse transcription polymerase chain reaction scans to differentiate between COVID-19 and pneumonia. However, these methods suffer from large training data requirements, unreliable images, and uncertain clinical diagnosis. Thus, in this paper, we used a machine learning model to differentiate between COVID-19 and pneumonia via radiomic features using a bias-minimized dataset of chest X-ray scans. We used logistic regression (LR), naive Bayes (NB), support vector machine (SVM), k-nearest neighbor (KNN), bagging, random forest (RF), extreme gradient boosting (XGB), and light gradient boosting machine (LGBM) to differentiate between COVID-19 and pneumonia based on training data. Further, we used a grid search to determine optimal hyperparameters for each machine learning model and 5-fold cross-validation to prevent overfitting. The identification performances of COVID-19 and pneumonia were compared with separately constructed test data for four machine learning models trained using the maximum probability, contrast, and difference variance of the gray level co-occurrence matrix (GLCM), and the skewness as input variables. The LGBM and bagging model showed the highest and lowest performances; the GLCM difference variance showed a high overall effect in all models. Thus, we confirmed that the radiomic features in chest X-rays can be used as indicators to differentiate between COVID-19 and pneumonia using machine learning. |
format | Online Article Text |
id | pubmed-9460643 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94606432022-09-10 Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray Kim, Young Jae Sensors (Basel) Article Machine learning approaches are employed to analyze differences in real-time reverse transcription polymerase chain reaction scans to differentiate between COVID-19 and pneumonia. However, these methods suffer from large training data requirements, unreliable images, and uncertain clinical diagnosis. Thus, in this paper, we used a machine learning model to differentiate between COVID-19 and pneumonia via radiomic features using a bias-minimized dataset of chest X-ray scans. We used logistic regression (LR), naive Bayes (NB), support vector machine (SVM), k-nearest neighbor (KNN), bagging, random forest (RF), extreme gradient boosting (XGB), and light gradient boosting machine (LGBM) to differentiate between COVID-19 and pneumonia based on training data. Further, we used a grid search to determine optimal hyperparameters for each machine learning model and 5-fold cross-validation to prevent overfitting. The identification performances of COVID-19 and pneumonia were compared with separately constructed test data for four machine learning models trained using the maximum probability, contrast, and difference variance of the gray level co-occurrence matrix (GLCM), and the skewness as input variables. The LGBM and bagging model showed the highest and lowest performances; the GLCM difference variance showed a high overall effect in all models. Thus, we confirmed that the radiomic features in chest X-rays can be used as indicators to differentiate between COVID-19 and pneumonia using machine learning. MDPI 2022-09-05 /pmc/articles/PMC9460643/ /pubmed/36081170 http://dx.doi.org/10.3390/s22176709 Text en © 2022 by the author. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kim, Young Jae Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title | Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title_full | Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title_fullStr | Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title_full_unstemmed | Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title_short | Machine Learning Model Based on Radiomic Features for Differentiation between COVID-19 and Pneumonia on Chest X-ray |
title_sort | machine learning model based on radiomic features for differentiation between covid-19 and pneumonia on chest x-ray |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460643/ https://www.ncbi.nlm.nih.gov/pubmed/36081170 http://dx.doi.org/10.3390/s22176709 |
work_keys_str_mv | AT kimyoungjae machinelearningmodelbasedonradiomicfeaturesfordifferentiationbetweencovid19andpneumoniaonchestxray |