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Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations

Wild Foeniculum vulgare populations from the region of Istria have been subjected to a genetic and chemical study. Headspace-gas chromatography analysis of volatile secondary metabolites and PCR-RFLP analysis of the ribosomal DNA internal transcribed spacer region has been chosen to analyze the chem...

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Autores principales: Križman, Mitja, Jakše, Jernej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460853/
https://www.ncbi.nlm.nih.gov/pubmed/36079624
http://dx.doi.org/10.3390/plants11172239
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author Križman, Mitja
Jakše, Jernej
author_facet Križman, Mitja
Jakše, Jernej
author_sort Križman, Mitja
collection PubMed
description Wild Foeniculum vulgare populations from the region of Istria have been subjected to a genetic and chemical study. Headspace-gas chromatography analysis of volatile secondary metabolites and PCR-RFLP analysis of the ribosomal DNA internal transcribed spacer region has been chosen to analyze the chemical and genetic traits of single plants, respectively. Large intrapopulation and interpopulation differences have been observed in both chemical profiles and restriction patterns of PCR products. The data from chemical and genetic analyses were pooled and used to assess allele frequencies of three putative genetic loci on individual populations. The pooled allele frequencies were used to determine interpopulation distances for phenogram reconstruction. The combined use of chemical and genetic datasets for genetic variation analysis proved to be a more comprehensive approach for such a study, compared to the use of single datasets, even using such relatively simple analytical tools.
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spelling pubmed-94608532022-09-10 Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations Križman, Mitja Jakše, Jernej Plants (Basel) Article Wild Foeniculum vulgare populations from the region of Istria have been subjected to a genetic and chemical study. Headspace-gas chromatography analysis of volatile secondary metabolites and PCR-RFLP analysis of the ribosomal DNA internal transcribed spacer region has been chosen to analyze the chemical and genetic traits of single plants, respectively. Large intrapopulation and interpopulation differences have been observed in both chemical profiles and restriction patterns of PCR products. The data from chemical and genetic analyses were pooled and used to assess allele frequencies of three putative genetic loci on individual populations. The pooled allele frequencies were used to determine interpopulation distances for phenogram reconstruction. The combined use of chemical and genetic datasets for genetic variation analysis proved to be a more comprehensive approach for such a study, compared to the use of single datasets, even using such relatively simple analytical tools. MDPI 2022-08-29 /pmc/articles/PMC9460853/ /pubmed/36079624 http://dx.doi.org/10.3390/plants11172239 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Križman, Mitja
Jakše, Jernej
Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title_full Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title_fullStr Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title_full_unstemmed Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title_short Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations
title_sort chemical and genetic variability of istrian foeniculum vulgare wild populations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9460853/
https://www.ncbi.nlm.nih.gov/pubmed/36079624
http://dx.doi.org/10.3390/plants11172239
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