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Develop a diagnostic tool for dementia using machine learning and non-imaging features
BACKGROUND: Early identification of Alzheimer’s disease or mild cognitive impairment can help guide direct prevention and supportive treatments, improve outcomes, and reduce medical costs. Existing advanced diagnostic tools are mostly based on neuroimaging and suffer from certain problems in cost, r...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9461143/ https://www.ncbi.nlm.nih.gov/pubmed/36092811 http://dx.doi.org/10.3389/fnagi.2022.945274 |
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author | Wang, Huan Sheng, Li Xu, Shanhu Jin, Yu Jin, Xiaoqing Qiao, Song Chen, Qingqing Xing, Wenmin Zhao, Zhenlei Yan, Jing Mao, Genxiang Xu, Xiaogang |
author_facet | Wang, Huan Sheng, Li Xu, Shanhu Jin, Yu Jin, Xiaoqing Qiao, Song Chen, Qingqing Xing, Wenmin Zhao, Zhenlei Yan, Jing Mao, Genxiang Xu, Xiaogang |
author_sort | Wang, Huan |
collection | PubMed |
description | BACKGROUND: Early identification of Alzheimer’s disease or mild cognitive impairment can help guide direct prevention and supportive treatments, improve outcomes, and reduce medical costs. Existing advanced diagnostic tools are mostly based on neuroimaging and suffer from certain problems in cost, reliability, repeatability, accessibility, ease of use, and clinical integration. To address these problems, we developed, evaluated, and implemented an early diagnostic tool using machine learning and non-imaging factors. METHODS AND RESULTS: A total of 654 participants aged 65 or older from the Nursing Home in Hangzhou, China were identified. Information collected from these patients includes dementia status and 70 demographic, cognitive, socioeconomic, and clinical features. Logistic regression, support vector machine (SVM), neural network, random forest, extreme gradient boosting (XGBoost), least absolute shrinkage and selection operator (LASSO), and best subset models were trained, tuned, and internally validated using a novel double cross validation algorithm and multiple evaluation metrics. The trained models were also compared and externally validated using a separate dataset with 1,100 participants from four communities in Zhejiang Province, China. The model with the best performance was then identified and implemented online with a friendly user interface. For the nursing dataset, the top three models are the neural network (AUROC = 0.9435), XGBoost (AUROC = 0.9398), and SVM with the polynomial kernel (AUROC = 0.9213). With the community dataset, the best three models are the random forest (AUROC = 0.9259), SVM with linear kernel (AUROC = 0.9282), and SVM with polynomial kernel (AUROC = 0.9213). The F1 scores and area under the precision-recall curve showed that the SVMs, neural network, and random forest were robust on the unbalanced community dataset. Overall the SVM with the polynomial kernel was found to be the best model. The LASSO and best subset models identified 17 features most relevant to dementia prediction, mostly from cognitive test results and socioeconomic characteristics. CONCLUSION: Our non-imaging-based diagnostic tool can effectively predict dementia outcomes. The tool can be conveniently incorporated into clinical practice. Its online implementation allows zero barriers to its use, which enhances the disease’s diagnosis, improves the quality of care, and reduces costs. |
format | Online Article Text |
id | pubmed-9461143 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94611432022-09-10 Develop a diagnostic tool for dementia using machine learning and non-imaging features Wang, Huan Sheng, Li Xu, Shanhu Jin, Yu Jin, Xiaoqing Qiao, Song Chen, Qingqing Xing, Wenmin Zhao, Zhenlei Yan, Jing Mao, Genxiang Xu, Xiaogang Front Aging Neurosci Aging Neuroscience BACKGROUND: Early identification of Alzheimer’s disease or mild cognitive impairment can help guide direct prevention and supportive treatments, improve outcomes, and reduce medical costs. Existing advanced diagnostic tools are mostly based on neuroimaging and suffer from certain problems in cost, reliability, repeatability, accessibility, ease of use, and clinical integration. To address these problems, we developed, evaluated, and implemented an early diagnostic tool using machine learning and non-imaging factors. METHODS AND RESULTS: A total of 654 participants aged 65 or older from the Nursing Home in Hangzhou, China were identified. Information collected from these patients includes dementia status and 70 demographic, cognitive, socioeconomic, and clinical features. Logistic regression, support vector machine (SVM), neural network, random forest, extreme gradient boosting (XGBoost), least absolute shrinkage and selection operator (LASSO), and best subset models were trained, tuned, and internally validated using a novel double cross validation algorithm and multiple evaluation metrics. The trained models were also compared and externally validated using a separate dataset with 1,100 participants from four communities in Zhejiang Province, China. The model with the best performance was then identified and implemented online with a friendly user interface. For the nursing dataset, the top three models are the neural network (AUROC = 0.9435), XGBoost (AUROC = 0.9398), and SVM with the polynomial kernel (AUROC = 0.9213). With the community dataset, the best three models are the random forest (AUROC = 0.9259), SVM with linear kernel (AUROC = 0.9282), and SVM with polynomial kernel (AUROC = 0.9213). The F1 scores and area under the precision-recall curve showed that the SVMs, neural network, and random forest were robust on the unbalanced community dataset. Overall the SVM with the polynomial kernel was found to be the best model. The LASSO and best subset models identified 17 features most relevant to dementia prediction, mostly from cognitive test results and socioeconomic characteristics. CONCLUSION: Our non-imaging-based diagnostic tool can effectively predict dementia outcomes. The tool can be conveniently incorporated into clinical practice. Its online implementation allows zero barriers to its use, which enhances the disease’s diagnosis, improves the quality of care, and reduces costs. Frontiers Media S.A. 2022-08-29 /pmc/articles/PMC9461143/ /pubmed/36092811 http://dx.doi.org/10.3389/fnagi.2022.945274 Text en Copyright © 2022 Wang, Sheng, Xu, Jin, Jin, Qiao, Chen, Xing, Zhao, Yan, Mao and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Aging Neuroscience Wang, Huan Sheng, Li Xu, Shanhu Jin, Yu Jin, Xiaoqing Qiao, Song Chen, Qingqing Xing, Wenmin Zhao, Zhenlei Yan, Jing Mao, Genxiang Xu, Xiaogang Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title | Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title_full | Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title_fullStr | Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title_full_unstemmed | Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title_short | Develop a diagnostic tool for dementia using machine learning and non-imaging features |
title_sort | develop a diagnostic tool for dementia using machine learning and non-imaging features |
topic | Aging Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9461143/ https://www.ncbi.nlm.nih.gov/pubmed/36092811 http://dx.doi.org/10.3389/fnagi.2022.945274 |
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