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Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation

The design of new protein variants is usually confined to slightly “fixing” an already existing protein, adapting it to certain conditions or to a new substrate. This is relatively easy to do if the fragment of the protein to be affected, such as the active site of the protein, is known. But what if...

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Autores principales: Majorina, M. A., Melnik, T. N., Glukhov, A. S., Melnik, B. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462454/
https://www.ncbi.nlm.nih.gov/pubmed/36090043
http://dx.doi.org/10.3389/fmolb.2022.983009
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author Majorina, M. A.
Melnik, T. N.
Glukhov, A. S.
Melnik, B. S.
author_facet Majorina, M. A.
Melnik, T. N.
Glukhov, A. S.
Melnik, B. S.
author_sort Majorina, M. A.
collection PubMed
description The design of new protein variants is usually confined to slightly “fixing” an already existing protein, adapting it to certain conditions or to a new substrate. This is relatively easy to do if the fragment of the protein to be affected, such as the active site of the protein, is known. But what if you need to “fix” the stability of a protein or the rate of its native or intermediate state formation? Having studied a large number of protein mutant forms, we have established the effect of various amino acid substitutions on the energy landscape of the protein. As a result, we have revealed a number of patterns to help researchers identify amino acid residues that determine the folding rate and the stability of globular proteins states and design a mutant form of a protein with desired properties.
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spelling pubmed-94624542022-09-10 Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation Majorina, M. A. Melnik, T. N. Glukhov, A. S. Melnik, B. S. Front Mol Biosci Molecular Biosciences The design of new protein variants is usually confined to slightly “fixing” an already existing protein, adapting it to certain conditions or to a new substrate. This is relatively easy to do if the fragment of the protein to be affected, such as the active site of the protein, is known. But what if you need to “fix” the stability of a protein or the rate of its native or intermediate state formation? Having studied a large number of protein mutant forms, we have established the effect of various amino acid substitutions on the energy landscape of the protein. As a result, we have revealed a number of patterns to help researchers identify amino acid residues that determine the folding rate and the stability of globular proteins states and design a mutant form of a protein with desired properties. Frontiers Media S.A. 2022-08-26 /pmc/articles/PMC9462454/ /pubmed/36090043 http://dx.doi.org/10.3389/fmolb.2022.983009 Text en Copyright © 2022 Majorina, Melnik, Glukhov and Melnik. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Majorina, M. A.
Melnik, T. N.
Glukhov, A. S.
Melnik, B. S.
Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title_full Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title_fullStr Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title_full_unstemmed Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title_short Some useful ideas for multistate protein design: Effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
title_sort some useful ideas for multistate protein design: effect of amino acid substitutions on the multistate proteins stability and the rate of protein structure formation
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462454/
https://www.ncbi.nlm.nih.gov/pubmed/36090043
http://dx.doi.org/10.3389/fmolb.2022.983009
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