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N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the pro...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462982/ https://www.ncbi.nlm.nih.gov/pubmed/36090906 http://dx.doi.org/10.1155/2022/5240611 |
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author | Zhou, Yang Guan, Xuhui Wang, Shuncong Sun, Huanhuan Ma, Haiqing |
author_facet | Zhou, Yang Guan, Xuhui Wang, Shuncong Sun, Huanhuan Ma, Haiqing |
author_sort | Zhou, Yang |
collection | PubMed |
description | BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the prognosis of LUSC patients. MATERIALS AND METHODS: The data of the current study were accessed from the TCGA database. Pearson correlation analysis was performed to identify lncRNAs correlated to m(6)A. Next, an m(6)A-related lncRNAs risk model was built using a single factor, least absolute association, selection operator, and multivariate Cox regression analysis. RESULTS: The relevance between 23 m(6)A genes and 14,056 lncRNAs is shown by Pearson correlation analysis by Sankey diagram. Multivariate Cox regression analysis determined that 11 m(6)A-lncRNAs show predictive potential in prognosis, which is confirmed by the consistency index, Kaplan–Meier analysis, principal component analysis, and ROC curve. Additionally, the immune analysis showed that the enrichment of immune cells, major histocompatibility complex molecules, and immune checkpoints in the high and low-risk subgroups were markedly disparate, with the high-risk group showing a stronger immune escape ability and a worse response to immunotherapy. CONCLUSION: In conclusion, the risk model based on m(6)A-related lncRNAs showed great promise in predicting the prognosis and the efficacy of immunotherapy. |
format | Online Article Text |
id | pubmed-9462982 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-94629822022-09-10 N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma Zhou, Yang Guan, Xuhui Wang, Shuncong Sun, Huanhuan Ma, Haiqing J Oncol Research Article BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the prognosis of LUSC patients. MATERIALS AND METHODS: The data of the current study were accessed from the TCGA database. Pearson correlation analysis was performed to identify lncRNAs correlated to m(6)A. Next, an m(6)A-related lncRNAs risk model was built using a single factor, least absolute association, selection operator, and multivariate Cox regression analysis. RESULTS: The relevance between 23 m(6)A genes and 14,056 lncRNAs is shown by Pearson correlation analysis by Sankey diagram. Multivariate Cox regression analysis determined that 11 m(6)A-lncRNAs show predictive potential in prognosis, which is confirmed by the consistency index, Kaplan–Meier analysis, principal component analysis, and ROC curve. Additionally, the immune analysis showed that the enrichment of immune cells, major histocompatibility complex molecules, and immune checkpoints in the high and low-risk subgroups were markedly disparate, with the high-risk group showing a stronger immune escape ability and a worse response to immunotherapy. CONCLUSION: In conclusion, the risk model based on m(6)A-related lncRNAs showed great promise in predicting the prognosis and the efficacy of immunotherapy. Hindawi 2022-09-02 /pmc/articles/PMC9462982/ /pubmed/36090906 http://dx.doi.org/10.1155/2022/5240611 Text en Copyright © 2022 Yang Zhou et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhou, Yang Guan, Xuhui Wang, Shuncong Sun, Huanhuan Ma, Haiqing N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title | N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title_full | N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title_fullStr | N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title_full_unstemmed | N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title_short | N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma |
title_sort | n6-methyladenosine (m(6)a)-related lncrnas are potential signatures for predicting prognosis and immune response in lung squamous cell carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462982/ https://www.ncbi.nlm.nih.gov/pubmed/36090906 http://dx.doi.org/10.1155/2022/5240611 |
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