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N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma

BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the pro...

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Autores principales: Zhou, Yang, Guan, Xuhui, Wang, Shuncong, Sun, Huanhuan, Ma, Haiqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462982/
https://www.ncbi.nlm.nih.gov/pubmed/36090906
http://dx.doi.org/10.1155/2022/5240611
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author Zhou, Yang
Guan, Xuhui
Wang, Shuncong
Sun, Huanhuan
Ma, Haiqing
author_facet Zhou, Yang
Guan, Xuhui
Wang, Shuncong
Sun, Huanhuan
Ma, Haiqing
author_sort Zhou, Yang
collection PubMed
description BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the prognosis of LUSC patients. MATERIALS AND METHODS: The data of the current study were accessed from the TCGA database. Pearson correlation analysis was performed to identify lncRNAs correlated to m(6)A. Next, an m(6)A-related lncRNAs risk model was built using a single factor, least absolute association, selection operator, and multivariate Cox regression analysis. RESULTS: The relevance between 23 m(6)A genes and 14,056 lncRNAs is shown by Pearson correlation analysis by Sankey diagram. Multivariate Cox regression analysis determined that 11 m(6)A-lncRNAs show predictive potential in prognosis, which is confirmed by the consistency index, Kaplan–Meier analysis, principal component analysis, and ROC curve. Additionally, the immune analysis showed that the enrichment of immune cells, major histocompatibility complex molecules, and immune checkpoints in the high and low-risk subgroups were markedly disparate, with the high-risk group showing a stronger immune escape ability and a worse response to immunotherapy. CONCLUSION: In conclusion, the risk model based on m(6)A-related lncRNAs showed great promise in predicting the prognosis and the efficacy of immunotherapy.
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spelling pubmed-94629822022-09-10 N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma Zhou, Yang Guan, Xuhui Wang, Shuncong Sun, Huanhuan Ma, Haiqing J Oncol Research Article BACKGROUND: Despite increasing understanding of m(6)A-related lncRNAs in lung cancer, the role of m(6)A-related lncRNAs in the prognosis and treatment of lung squamous cell carcinoma is poorly understood to date. Thus, the current study aims to elucidate its role and build a model to predict the prognosis of LUSC patients. MATERIALS AND METHODS: The data of the current study were accessed from the TCGA database. Pearson correlation analysis was performed to identify lncRNAs correlated to m(6)A. Next, an m(6)A-related lncRNAs risk model was built using a single factor, least absolute association, selection operator, and multivariate Cox regression analysis. RESULTS: The relevance between 23 m(6)A genes and 14,056 lncRNAs is shown by Pearson correlation analysis by Sankey diagram. Multivariate Cox regression analysis determined that 11 m(6)A-lncRNAs show predictive potential in prognosis, which is confirmed by the consistency index, Kaplan–Meier analysis, principal component analysis, and ROC curve. Additionally, the immune analysis showed that the enrichment of immune cells, major histocompatibility complex molecules, and immune checkpoints in the high and low-risk subgroups were markedly disparate, with the high-risk group showing a stronger immune escape ability and a worse response to immunotherapy. CONCLUSION: In conclusion, the risk model based on m(6)A-related lncRNAs showed great promise in predicting the prognosis and the efficacy of immunotherapy. Hindawi 2022-09-02 /pmc/articles/PMC9462982/ /pubmed/36090906 http://dx.doi.org/10.1155/2022/5240611 Text en Copyright © 2022 Yang Zhou et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhou, Yang
Guan, Xuhui
Wang, Shuncong
Sun, Huanhuan
Ma, Haiqing
N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title_full N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title_fullStr N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title_full_unstemmed N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title_short N6-Methyladenosine (m(6)A)-Related lncRNAs Are Potential Signatures for Predicting Prognosis and Immune Response in Lung Squamous Cell Carcinoma
title_sort n6-methyladenosine (m(6)a)-related lncrnas are potential signatures for predicting prognosis and immune response in lung squamous cell carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9462982/
https://www.ncbi.nlm.nih.gov/pubmed/36090906
http://dx.doi.org/10.1155/2022/5240611
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