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Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses

The present‐day population structure of a species reflects the combination of oceanographic currents, life‐history traits, and historical events. However, little is known about the mechanisms that have shaped the gene lineage distribution of marine species inhabiting the Southeast Pacific. Here, we...

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Autores principales: Zelada‐Mázmela, Eliana, Reyes‐Flores, Lorenzo E., Sánchez‐Velásquez, Julissa J., Ingar, Claudia, Santos‐Rojas, Luis E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9463045/
https://www.ncbi.nlm.nih.gov/pubmed/36177117
http://dx.doi.org/10.1002/ece3.9276
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author Zelada‐Mázmela, Eliana
Reyes‐Flores, Lorenzo E.
Sánchez‐Velásquez, Julissa J.
Ingar, Claudia
Santos‐Rojas, Luis E.
author_facet Zelada‐Mázmela, Eliana
Reyes‐Flores, Lorenzo E.
Sánchez‐Velásquez, Julissa J.
Ingar, Claudia
Santos‐Rojas, Luis E.
author_sort Zelada‐Mázmela, Eliana
collection PubMed
description The present‐day population structure of a species reflects the combination of oceanographic currents, life‐history traits, and historical events. However, little is known about the mechanisms that have shaped the gene lineage distribution of marine species inhabiting the Southeast Pacific. Here, we provide a comprehensive phylogeographical study of a species distributed along the Southeast Pacific coastal region by analyzing the endemic gastropod Thaisella chocolata (Duclos, 1832). Sequencing of mitochondrial cytochrome c oxidase subunit 1 (CO1) and 16S rRNA revealed strikingly high haplotypic nucleotide and genetic diversity but a lack of significant population differentiation within the survey area. In addition, a star‐shaped phylogeny and significantly negative Tajima's D and Fu's Fs tests of neutrality suggested historical occurrence of rapid demographic expansion. Mismatch distributions and Bayesian inference analyses also confirmed T. chocolata to have undergone two ancestral demographic expansions. Calculations suggested that these expansions began in the lower and middle Pleistocene epoch, likely due to continental shelf development and climatic conditions. These findings could help establish a genetic baseline for T. chocolata as the first step toward sustainable spatial management of this species, as well as understand this species’ response to future climate change.
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spelling pubmed-94630452022-09-28 Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses Zelada‐Mázmela, Eliana Reyes‐Flores, Lorenzo E. Sánchez‐Velásquez, Julissa J. Ingar, Claudia Santos‐Rojas, Luis E. Ecol Evol Research Articles The present‐day population structure of a species reflects the combination of oceanographic currents, life‐history traits, and historical events. However, little is known about the mechanisms that have shaped the gene lineage distribution of marine species inhabiting the Southeast Pacific. Here, we provide a comprehensive phylogeographical study of a species distributed along the Southeast Pacific coastal region by analyzing the endemic gastropod Thaisella chocolata (Duclos, 1832). Sequencing of mitochondrial cytochrome c oxidase subunit 1 (CO1) and 16S rRNA revealed strikingly high haplotypic nucleotide and genetic diversity but a lack of significant population differentiation within the survey area. In addition, a star‐shaped phylogeny and significantly negative Tajima's D and Fu's Fs tests of neutrality suggested historical occurrence of rapid demographic expansion. Mismatch distributions and Bayesian inference analyses also confirmed T. chocolata to have undergone two ancestral demographic expansions. Calculations suggested that these expansions began in the lower and middle Pleistocene epoch, likely due to continental shelf development and climatic conditions. These findings could help establish a genetic baseline for T. chocolata as the first step toward sustainable spatial management of this species, as well as understand this species’ response to future climate change. John Wiley and Sons Inc. 2022-09-09 /pmc/articles/PMC9463045/ /pubmed/36177117 http://dx.doi.org/10.1002/ece3.9276 Text en © 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Zelada‐Mázmela, Eliana
Reyes‐Flores, Lorenzo E.
Sánchez‐Velásquez, Julissa J.
Ingar, Claudia
Santos‐Rojas, Luis E.
Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title_full Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title_fullStr Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title_full_unstemmed Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title_short Population structure and demographic history of the gastropod Thaisella chocolata (Duclos, 1832) from the Southeast Pacific inferred from mitochondrial DNA analyses
title_sort population structure and demographic history of the gastropod thaisella chocolata (duclos, 1832) from the southeast pacific inferred from mitochondrial dna analyses
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9463045/
https://www.ncbi.nlm.nih.gov/pubmed/36177117
http://dx.doi.org/10.1002/ece3.9276
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