Cargando…
Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model
Alzheimer's disease (AD) represents the main form of dementia; however, valid diagnosis and treatment measures are lacking. The discovery of valuable biomarkers through omics technologies can help solve this problem. For this reason, metabolomic analysis using ultra-performance liquid chromatog...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Xi'an Jiaotong University
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9463486/ https://www.ncbi.nlm.nih.gov/pubmed/36105160 http://dx.doi.org/10.1016/j.jpha.2022.04.003 |
_version_ | 1784787400029896704 |
---|---|
author | Liu, Yanmeng Zhang, Xinyue Lin, Weiwei Kehriman, Nurmuhammat Kuang, Wen Ling, Xiaomei |
author_facet | Liu, Yanmeng Zhang, Xinyue Lin, Weiwei Kehriman, Nurmuhammat Kuang, Wen Ling, Xiaomei |
author_sort | Liu, Yanmeng |
collection | PubMed |
description | Alzheimer's disease (AD) represents the main form of dementia; however, valid diagnosis and treatment measures are lacking. The discovery of valuable biomarkers through omics technologies can help solve this problem. For this reason, metabolomic analysis using ultra-performance liquid chromatography coupled with quadrupole time-of-flight tandem mass spectrometry (UPLC-Q-TOF-MS) was carried out on plasma, hippocampus, and cortex samples of an AD rat model. Based on the metabolomic data, we report a multi-factor combined biomarker screening strategy to rapidly and accurately identify potential biomarkers. Compared with the usual procedure, our strategy can identify fewer biomarkers with higher diagnostic specificity and sensitivity. In addition to diagnosis, the potential biomarkers identified using our strategy were also beneficial for drug evaluation. Multi-factor combined biomarker screening strategy was used to identify differential metabolites from a rat model of amyloid beta peptide 1–40 (Aβ(1−40)) plus ibotenic acid-induced AD (compared with the controls) for the first time; lysophosphatidylcholine (LysoPC) and intermediates of sphingolipid metabolism were screened as potential biomarkers. Subsequently, the effects of donepezil and pine nut were successfully reflected by regulating the levels of the abovementioned biomarkers and metabolic profile distribution in partial least squares-discriminant analysis (PLS-DA). This novel biomarker screening strategy can be used to analyze other metabolomic data to simultaneously enable disease diagnosis and drug evaluation. |
format | Online Article Text |
id | pubmed-9463486 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Xi'an Jiaotong University |
record_format | MEDLINE/PubMed |
spelling | pubmed-94634862022-09-13 Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model Liu, Yanmeng Zhang, Xinyue Lin, Weiwei Kehriman, Nurmuhammat Kuang, Wen Ling, Xiaomei J Pharm Anal Original Article Alzheimer's disease (AD) represents the main form of dementia; however, valid diagnosis and treatment measures are lacking. The discovery of valuable biomarkers through omics technologies can help solve this problem. For this reason, metabolomic analysis using ultra-performance liquid chromatography coupled with quadrupole time-of-flight tandem mass spectrometry (UPLC-Q-TOF-MS) was carried out on plasma, hippocampus, and cortex samples of an AD rat model. Based on the metabolomic data, we report a multi-factor combined biomarker screening strategy to rapidly and accurately identify potential biomarkers. Compared with the usual procedure, our strategy can identify fewer biomarkers with higher diagnostic specificity and sensitivity. In addition to diagnosis, the potential biomarkers identified using our strategy were also beneficial for drug evaluation. Multi-factor combined biomarker screening strategy was used to identify differential metabolites from a rat model of amyloid beta peptide 1–40 (Aβ(1−40)) plus ibotenic acid-induced AD (compared with the controls) for the first time; lysophosphatidylcholine (LysoPC) and intermediates of sphingolipid metabolism were screened as potential biomarkers. Subsequently, the effects of donepezil and pine nut were successfully reflected by regulating the levels of the abovementioned biomarkers and metabolic profile distribution in partial least squares-discriminant analysis (PLS-DA). This novel biomarker screening strategy can be used to analyze other metabolomic data to simultaneously enable disease diagnosis and drug evaluation. Xi'an Jiaotong University 2022-08 2022-04-19 /pmc/articles/PMC9463486/ /pubmed/36105160 http://dx.doi.org/10.1016/j.jpha.2022.04.003 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Liu, Yanmeng Zhang, Xinyue Lin, Weiwei Kehriman, Nurmuhammat Kuang, Wen Ling, Xiaomei Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title | Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title_full | Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title_fullStr | Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title_full_unstemmed | Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title_short | Multi-factor combined biomarker screening strategy to rapidly diagnose Alzheimer's disease and evaluate drug effect based on a rat model |
title_sort | multi-factor combined biomarker screening strategy to rapidly diagnose alzheimer's disease and evaluate drug effect based on a rat model |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9463486/ https://www.ncbi.nlm.nih.gov/pubmed/36105160 http://dx.doi.org/10.1016/j.jpha.2022.04.003 |
work_keys_str_mv | AT liuyanmeng multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel AT zhangxinyue multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel AT linweiwei multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel AT kehrimannurmuhammat multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel AT kuangwen multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel AT lingxiaomei multifactorcombinedbiomarkerscreeningstrategytorapidlydiagnosealzheimersdiseaseandevaluatedrugeffectbasedonaratmodel |