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GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion

BACKGROUND: Analysis of histopathological slices of gastric cancer is the gold standard for diagnosing gastric cancer, while manual identification is time-consuming and highly relies on the experience of pathologists. Artificial intelligence methods, particularly deep learning, can assist pathologis...

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Autores principales: Shi, Xu, Wang, Long, Li, Yu, Wu, Jian, Huang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9464831/
https://www.ncbi.nlm.nih.gov/pubmed/36106104
http://dx.doi.org/10.3389/fonc.2022.901475
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author Shi, Xu
Wang, Long
Li, Yu
Wu, Jian
Huang, Hong
author_facet Shi, Xu
Wang, Long
Li, Yu
Wu, Jian
Huang, Hong
author_sort Shi, Xu
collection PubMed
description BACKGROUND: Analysis of histopathological slices of gastric cancer is the gold standard for diagnosing gastric cancer, while manual identification is time-consuming and highly relies on the experience of pathologists. Artificial intelligence methods, particularly deep learning, can assist pathologists in finding cancerous tissues and realizing automated detection. However, due to the variety of shapes and sizes of gastric cancer lesions, as well as many interfering factors, GCHIs have a high level of complexity and difficulty in accurately finding the lesion region. Traditional deep learning methods cannot effectively extract discriminative features because of their simple decoding method so they cannot detect lesions accurately, and there is less research dedicated to detecting gastric cancer lesions. METHODS: We propose a gastric cancer lesion detection network (GCLDNet). At first, GCLDNet designs a level feature aggregation structure in decoder, which can effectively fuse deep and shallow features of GCHIs. Second, an attention feature fusion module is introduced to accurately locate the lesion area, which merges attention features of different scales and obtains rich discriminative information focusing on lesion. Finally, focal Tversky loss (FTL) is employed as a loss function to depress false-negative predictions and mine difficult samples. RESULTS: Experimental results on two GCHI datasets of SEED and BOT show that DSCs of the GCLDNet are 0.8265 and 0.8991, ACCs are 0.8827 and 0.8949, JIs are 0.7092 and 0.8182, and PREs are 0.7820 and 0.8763, respectively. CONCLUSIONS: Experimental results demonstrate the effectiveness of GCLDNet in the detection of gastric cancer lesions. Compared with other state-of-the-art (SOTA) detection methods, the GCLDNet obtains a more satisfactory performance. This research can provide good auxiliary support for pathologists in clinical diagnosis.
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spelling pubmed-94648312022-09-13 GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion Shi, Xu Wang, Long Li, Yu Wu, Jian Huang, Hong Front Oncol Oncology BACKGROUND: Analysis of histopathological slices of gastric cancer is the gold standard for diagnosing gastric cancer, while manual identification is time-consuming and highly relies on the experience of pathologists. Artificial intelligence methods, particularly deep learning, can assist pathologists in finding cancerous tissues and realizing automated detection. However, due to the variety of shapes and sizes of gastric cancer lesions, as well as many interfering factors, GCHIs have a high level of complexity and difficulty in accurately finding the lesion region. Traditional deep learning methods cannot effectively extract discriminative features because of their simple decoding method so they cannot detect lesions accurately, and there is less research dedicated to detecting gastric cancer lesions. METHODS: We propose a gastric cancer lesion detection network (GCLDNet). At first, GCLDNet designs a level feature aggregation structure in decoder, which can effectively fuse deep and shallow features of GCHIs. Second, an attention feature fusion module is introduced to accurately locate the lesion area, which merges attention features of different scales and obtains rich discriminative information focusing on lesion. Finally, focal Tversky loss (FTL) is employed as a loss function to depress false-negative predictions and mine difficult samples. RESULTS: Experimental results on two GCHI datasets of SEED and BOT show that DSCs of the GCLDNet are 0.8265 and 0.8991, ACCs are 0.8827 and 0.8949, JIs are 0.7092 and 0.8182, and PREs are 0.7820 and 0.8763, respectively. CONCLUSIONS: Experimental results demonstrate the effectiveness of GCLDNet in the detection of gastric cancer lesions. Compared with other state-of-the-art (SOTA) detection methods, the GCLDNet obtains a more satisfactory performance. This research can provide good auxiliary support for pathologists in clinical diagnosis. Frontiers Media S.A. 2022-08-29 /pmc/articles/PMC9464831/ /pubmed/36106104 http://dx.doi.org/10.3389/fonc.2022.901475 Text en Copyright © 2022 Shi, Wang, Li, Wu and Huang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Shi, Xu
Wang, Long
Li, Yu
Wu, Jian
Huang, Hong
GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title_full GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title_fullStr GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title_full_unstemmed GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title_short GCLDNet: Gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
title_sort gcldnet: gastric cancer lesion detection network combining level feature aggregation and attention feature fusion
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9464831/
https://www.ncbi.nlm.nih.gov/pubmed/36106104
http://dx.doi.org/10.3389/fonc.2022.901475
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