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Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one l...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467529/ https://www.ncbi.nlm.nih.gov/pubmed/36106185 http://dx.doi.org/10.1080/23802359.2022.2119105 |
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author | Shi, Xiaohua Mao, Lihui Jin, Liang Ma, Guangying |
author_facet | Shi, Xiaohua Mao, Lihui Jin, Liang Ma, Guangying |
author_sort | Shi, Xiaohua |
collection | PubMed |
description | Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one large single copy (LSC) region (84994 bp), one small single copy (SSC) region (17,825 bp), and a pair of inverted repeat (IR) regions (31938 bp). This chloroplast genome encoded 130 genes, out of which 85 code for proteins, 37 for transfer RNAs, and 8 for ribosomal RNAs. Simple sequence repeat (SSR) markers and the top variable coding regions were identified. Our study lays a foundation for further research, such as species differentiation and phylogenetic reconstruction of the Helleborus genus. |
format | Online Article Text |
id | pubmed-9467529 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-94675292022-09-13 Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) Shi, Xiaohua Mao, Lihui Jin, Liang Ma, Guangying Mitochondrial DNA B Resour Mitogenome Announcement Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one large single copy (LSC) region (84994 bp), one small single copy (SSC) region (17,825 bp), and a pair of inverted repeat (IR) regions (31938 bp). This chloroplast genome encoded 130 genes, out of which 85 code for proteins, 37 for transfer RNAs, and 8 for ribosomal RNAs. Simple sequence repeat (SSR) markers and the top variable coding regions were identified. Our study lays a foundation for further research, such as species differentiation and phylogenetic reconstruction of the Helleborus genus. Taylor & Francis 2022-09-07 /pmc/articles/PMC9467529/ /pubmed/36106185 http://dx.doi.org/10.1080/23802359.2022.2119105 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Shi, Xiaohua Mao, Lihui Jin, Liang Ma, Guangying Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title | Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title_full | Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title_fullStr | Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title_short | Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) |
title_sort | characterization of the complete chloroplast genome of the helleborus atrorubens waldst. & kit. (ranunculaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467529/ https://www.ncbi.nlm.nih.gov/pubmed/36106185 http://dx.doi.org/10.1080/23802359.2022.2119105 |
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