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Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)

Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one l...

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Autores principales: Shi, Xiaohua, Mao, Lihui, Jin, Liang, Ma, Guangying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467529/
https://www.ncbi.nlm.nih.gov/pubmed/36106185
http://dx.doi.org/10.1080/23802359.2022.2119105
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author Shi, Xiaohua
Mao, Lihui
Jin, Liang
Ma, Guangying
author_facet Shi, Xiaohua
Mao, Lihui
Jin, Liang
Ma, Guangying
author_sort Shi, Xiaohua
collection PubMed
description Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one large single copy (LSC) region (84994 bp), one small single copy (SSC) region (17,825 bp), and a pair of inverted repeat (IR) regions (31938 bp). This chloroplast genome encoded 130 genes, out of which 85 code for proteins, 37 for transfer RNAs, and 8 for ribosomal RNAs. Simple sequence repeat (SSR) markers and the top variable coding regions were identified. Our study lays a foundation for further research, such as species differentiation and phylogenetic reconstruction of the Helleborus genus.
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spelling pubmed-94675292022-09-13 Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae) Shi, Xiaohua Mao, Lihui Jin, Liang Ma, Guangying Mitochondrial DNA B Resour Mitogenome Announcement Helleborus atrorubens is an economically important perennial garden plant with medicinal value. Here, we sequenced the complete chloroplast genome of H. atrorubens. The results revealed the chloroplast genome to be 166,695 bp in length. It possesses a typical quadripartite structure containing one large single copy (LSC) region (84994 bp), one small single copy (SSC) region (17,825 bp), and a pair of inverted repeat (IR) regions (31938 bp). This chloroplast genome encoded 130 genes, out of which 85 code for proteins, 37 for transfer RNAs, and 8 for ribosomal RNAs. Simple sequence repeat (SSR) markers and the top variable coding regions were identified. Our study lays a foundation for further research, such as species differentiation and phylogenetic reconstruction of the Helleborus genus. Taylor & Francis 2022-09-07 /pmc/articles/PMC9467529/ /pubmed/36106185 http://dx.doi.org/10.1080/23802359.2022.2119105 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Shi, Xiaohua
Mao, Lihui
Jin, Liang
Ma, Guangying
Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title_full Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title_fullStr Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title_short Characterization of the complete chloroplast genome of the Helleborus atrorubens Waldst. & Kit. (Ranunculaceae)
title_sort characterization of the complete chloroplast genome of the helleborus atrorubens waldst. & kit. (ranunculaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467529/
https://www.ncbi.nlm.nih.gov/pubmed/36106185
http://dx.doi.org/10.1080/23802359.2022.2119105
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