Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)

Cnaphalocrocis patnalis (Bradley 1981) is a major pest that threatens the safety of rice production in the world. In the present study, we determined the complete mitogenome of C. patnalis. This mitogenome was 15,305 bp in length (GenBank accession No. OL449028), which contained two ribosomal RNA ge...

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Autores principales: Tang, Jihong, Tang, Xue, Lu, Hui, Lin, Nanfang, Cheng, Chunxi, Lyu, Baoqian, Li, Jinhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467562/
https://www.ncbi.nlm.nih.gov/pubmed/36106186
http://dx.doi.org/10.1080/23802359.2022.2116949
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author Tang, Jihong
Tang, Xue
Lu, Hui
Lin, Nanfang
Cheng, Chunxi
Lyu, Baoqian
Li, Jinhua
author_facet Tang, Jihong
Tang, Xue
Lu, Hui
Lin, Nanfang
Cheng, Chunxi
Lyu, Baoqian
Li, Jinhua
author_sort Tang, Jihong
collection PubMed
description Cnaphalocrocis patnalis (Bradley 1981) is a major pest that threatens the safety of rice production in the world. In the present study, we determined the complete mitogenome of C. patnalis. This mitogenome was 15,305 bp in length (GenBank accession No. OL449028), which contained two ribosomal RNA genes, 22 transfer RNAs, 13 protein-coding genes (PCGs) and one non-coding AT-rich region with a length of 344 bp. All the 22 tRNA genes displayed a typical clover-leaf structure, except for trnS1. Twelve PCGs were initiated by ATN codons, and COX1 started with TTG. All the PCGs used the typical stop codon ‘TAA’ and ‘TAG.’ Phylogenetic tree demonstrated that C. patnalis belongs to the family Crambidae.
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spelling pubmed-94675622022-09-13 Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae) Tang, Jihong Tang, Xue Lu, Hui Lin, Nanfang Cheng, Chunxi Lyu, Baoqian Li, Jinhua Mitochondrial DNA B Resour Mitogenome Announcement Cnaphalocrocis patnalis (Bradley 1981) is a major pest that threatens the safety of rice production in the world. In the present study, we determined the complete mitogenome of C. patnalis. This mitogenome was 15,305 bp in length (GenBank accession No. OL449028), which contained two ribosomal RNA genes, 22 transfer RNAs, 13 protein-coding genes (PCGs) and one non-coding AT-rich region with a length of 344 bp. All the 22 tRNA genes displayed a typical clover-leaf structure, except for trnS1. Twelve PCGs were initiated by ATN codons, and COX1 started with TTG. All the PCGs used the typical stop codon ‘TAA’ and ‘TAG.’ Phylogenetic tree demonstrated that C. patnalis belongs to the family Crambidae. Taylor & Francis 2022-09-08 /pmc/articles/PMC9467562/ /pubmed/36106186 http://dx.doi.org/10.1080/23802359.2022.2116949 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tang, Jihong
Tang, Xue
Lu, Hui
Lin, Nanfang
Cheng, Chunxi
Lyu, Baoqian
Li, Jinhua
Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title_full Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title_fullStr Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title_full_unstemmed Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title_short Characterization of the complete mitochondrial genome and phylogenetic analysis of Cnaphalocrocis patnalis (Bradley 1981) (Lepidoptera: Crambidae)
title_sort characterization of the complete mitochondrial genome and phylogenetic analysis of cnaphalocrocis patnalis (bradley 1981) (lepidoptera: crambidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467562/
https://www.ncbi.nlm.nih.gov/pubmed/36106186
http://dx.doi.org/10.1080/23802359.2022.2116949
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