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Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate
Two different types of desaturations are employed by iron- and 2-oxoglutarate-dependent (Fe/2OG) enzymes to construct vinyl isonitrile and isocyanoacrylate moieties found in isonitrile-containing natural products. A substrate-bound protein structure reveals a plausible strategy to affect desaturatio...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467999/ https://www.ncbi.nlm.nih.gov/pubmed/36097268 http://dx.doi.org/10.1038/s41467-022-32870-4 |
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author | Kim, Wantae Chen, Tzu-Yu Cha, Lide Zhou, Grace Xing, Kristi Canty, Nicholas Koenig Zhang, Yan Chang, Wei-chen |
author_facet | Kim, Wantae Chen, Tzu-Yu Cha, Lide Zhou, Grace Xing, Kristi Canty, Nicholas Koenig Zhang, Yan Chang, Wei-chen |
author_sort | Kim, Wantae |
collection | PubMed |
description | Two different types of desaturations are employed by iron- and 2-oxoglutarate-dependent (Fe/2OG) enzymes to construct vinyl isonitrile and isocyanoacrylate moieties found in isonitrile-containing natural products. A substrate-bound protein structure reveals a plausible strategy to affect desaturation and hints at substrate promiscuity of these enzymes. Analogs are synthesized and used as mechanistic probes to validate structural observations. Instead of proceeding through hydroxylated intermediate as previously proposed, a plausible carbocation species is utilized to trigger C=C bond installation. These Fe/2OG enzymes can also accommodate analogs with opposite chirality and different functional groups including isonitrile-(D)-tyrosine, N-formyl tyrosine, and phloretic acid, while maintaining the reaction selectivity. |
format | Online Article Text |
id | pubmed-9467999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-94679992022-09-14 Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate Kim, Wantae Chen, Tzu-Yu Cha, Lide Zhou, Grace Xing, Kristi Canty, Nicholas Koenig Zhang, Yan Chang, Wei-chen Nat Commun Article Two different types of desaturations are employed by iron- and 2-oxoglutarate-dependent (Fe/2OG) enzymes to construct vinyl isonitrile and isocyanoacrylate moieties found in isonitrile-containing natural products. A substrate-bound protein structure reveals a plausible strategy to affect desaturation and hints at substrate promiscuity of these enzymes. Analogs are synthesized and used as mechanistic probes to validate structural observations. Instead of proceeding through hydroxylated intermediate as previously proposed, a plausible carbocation species is utilized to trigger C=C bond installation. These Fe/2OG enzymes can also accommodate analogs with opposite chirality and different functional groups including isonitrile-(D)-tyrosine, N-formyl tyrosine, and phloretic acid, while maintaining the reaction selectivity. Nature Publishing Group UK 2022-09-12 /pmc/articles/PMC9467999/ /pubmed/36097268 http://dx.doi.org/10.1038/s41467-022-32870-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kim, Wantae Chen, Tzu-Yu Cha, Lide Zhou, Grace Xing, Kristi Canty, Nicholas Koenig Zhang, Yan Chang, Wei-chen Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title | Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title_full | Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title_fullStr | Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title_full_unstemmed | Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title_short | Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
title_sort | elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9467999/ https://www.ncbi.nlm.nih.gov/pubmed/36097268 http://dx.doi.org/10.1038/s41467-022-32870-4 |
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