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A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers

COVID-19 pandemic has become a global major public health concern. Examining the meteorological risk factors and accurately predicting the incidence of the COVID-19 pandemic is an extremely important challenge. Therefore, in this study, we analyzed the relationship between meteorological factors and...

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Autores principales: Rahman, Md. Siddikur, Chowdhury, Arman Hossain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9469970/
https://www.ncbi.nlm.nih.gov/pubmed/36099253
http://dx.doi.org/10.1371/journal.pone.0273319
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author Rahman, Md. Siddikur
Chowdhury, Arman Hossain
author_facet Rahman, Md. Siddikur
Chowdhury, Arman Hossain
author_sort Rahman, Md. Siddikur
collection PubMed
description COVID-19 pandemic has become a global major public health concern. Examining the meteorological risk factors and accurately predicting the incidence of the COVID-19 pandemic is an extremely important challenge. Therefore, in this study, we analyzed the relationship between meteorological factors and COVID-19 transmission in SAARC countries. We also compared the predictive accuracy of Autoregressive Integrated Moving Average (ARIMAX) and eXtreme Gradient Boosting (XGBoost) methods for precise modelling of COVID-19 incidence. We compiled a daily dataset including confirmed COVID-19 case counts, minimum and maximum temperature (°C), relative humidity (%), surface pressure (kPa), precipitation (mm/day) and maximum wind speed (m/s) from the onset of the disease to January 29, 2022, in each country. The data were divided into training and test sets. The training data were used to fit ARIMAX model for examining significant meteorological risk factors. All significant factors were then used as covariates in ARIMAX and XGBoost models to predict the COVID-19 confirmed cases. We found that maximum temperature had a positive impact on the COVID-19 transmission in Afghanistan (β = 11.91, 95% CI: 4.77, 19.05) and India (β = 0.18, 95% CI: 0.01, 0.35). Surface pressure had a positive influence in Pakistan (β = 25.77, 95% CI: 7.85, 43.69) and Sri Lanka (β = 411.63, 95% CI: 49.04, 774.23). We also found that the XGBoost model can help improve prediction of COVID-19 cases in SAARC countries over the ARIMAX model. The study findings will help the scientific communities and policymakers to establish a more accurate early warning system to control the spread of the pandemic.
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spelling pubmed-94699702022-09-14 A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers Rahman, Md. Siddikur Chowdhury, Arman Hossain PLoS One Research Article COVID-19 pandemic has become a global major public health concern. Examining the meteorological risk factors and accurately predicting the incidence of the COVID-19 pandemic is an extremely important challenge. Therefore, in this study, we analyzed the relationship between meteorological factors and COVID-19 transmission in SAARC countries. We also compared the predictive accuracy of Autoregressive Integrated Moving Average (ARIMAX) and eXtreme Gradient Boosting (XGBoost) methods for precise modelling of COVID-19 incidence. We compiled a daily dataset including confirmed COVID-19 case counts, minimum and maximum temperature (°C), relative humidity (%), surface pressure (kPa), precipitation (mm/day) and maximum wind speed (m/s) from the onset of the disease to January 29, 2022, in each country. The data were divided into training and test sets. The training data were used to fit ARIMAX model for examining significant meteorological risk factors. All significant factors were then used as covariates in ARIMAX and XGBoost models to predict the COVID-19 confirmed cases. We found that maximum temperature had a positive impact on the COVID-19 transmission in Afghanistan (β = 11.91, 95% CI: 4.77, 19.05) and India (β = 0.18, 95% CI: 0.01, 0.35). Surface pressure had a positive influence in Pakistan (β = 25.77, 95% CI: 7.85, 43.69) and Sri Lanka (β = 411.63, 95% CI: 49.04, 774.23). We also found that the XGBoost model can help improve prediction of COVID-19 cases in SAARC countries over the ARIMAX model. The study findings will help the scientific communities and policymakers to establish a more accurate early warning system to control the spread of the pandemic. Public Library of Science 2022-09-13 /pmc/articles/PMC9469970/ /pubmed/36099253 http://dx.doi.org/10.1371/journal.pone.0273319 Text en © 2022 Rahman, Chowdhury https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Rahman, Md. Siddikur
Chowdhury, Arman Hossain
A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title_full A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title_fullStr A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title_full_unstemmed A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title_short A data-driven eXtreme gradient boosting machine learning model to predict COVID-19 transmission with meteorological drivers
title_sort data-driven extreme gradient boosting machine learning model to predict covid-19 transmission with meteorological drivers
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9469970/
https://www.ncbi.nlm.nih.gov/pubmed/36099253
http://dx.doi.org/10.1371/journal.pone.0273319
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