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Modeling toolchain for realistic simulation of photoacoustic data acquisition

SIGNIFICANCE: Physics-based simulations of photoacoustic (PA) signals are used to validate new methods, to characterize PA setups and to generate training datasets for machine learning. However, a thoroughly validated PA simulation toolchain that can simulate realistic images is still lacking. AIM:...

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Autores principales: Muller, Jan-Willem, Arabul, Mustafa Ü., Schwab, Hans-Martin, Rutten, Marcel C. M., van Sambeek, Marc R. H. M., Wu, Min, Lopata, Richard G. P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9470848/
https://www.ncbi.nlm.nih.gov/pubmed/36104838
http://dx.doi.org/10.1117/1.JBO.27.9.096005
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author Muller, Jan-Willem
Arabul, Mustafa Ü.
Schwab, Hans-Martin
Rutten, Marcel C. M.
van Sambeek, Marc R. H. M.
Wu, Min
Lopata, Richard G. P.
author_facet Muller, Jan-Willem
Arabul, Mustafa Ü.
Schwab, Hans-Martin
Rutten, Marcel C. M.
van Sambeek, Marc R. H. M.
Wu, Min
Lopata, Richard G. P.
author_sort Muller, Jan-Willem
collection PubMed
description SIGNIFICANCE: Physics-based simulations of photoacoustic (PA) signals are used to validate new methods, to characterize PA setups and to generate training datasets for machine learning. However, a thoroughly validated PA simulation toolchain that can simulate realistic images is still lacking. AIM: A quantitative toolchain was developed to model PA image acquisition in complex tissues, by simulating both the optical fluence and the acoustic wave propagation. APPROACH: Sampling techniques were developed to decrease artifacts in acoustic simulations. The performance of the simulations was analyzed by measuring the point spread function (PSF) and using a rotatable three-channel phantom, filled with cholesterol, a human carotid plaque sample, and porcine blood. Ex vivo human plaque samples were simulated to validate the methods in more complex tissues. RESULTS: The sampling techniques could enhance the quality of the simulated PA images effectively. The resolution and intensity of the PSF in the turbid medium matched the experimental data well. Overall, the appearance, signal-to-noise ratio and speckle of the images could be simulated accurately. CONCLUSIONS: A PA toolchain was developed and validated, and the results indicate a great potential of PA simulations in more complex and heterogeneous media.
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spelling pubmed-94708482022-09-20 Modeling toolchain for realistic simulation of photoacoustic data acquisition Muller, Jan-Willem Arabul, Mustafa Ü. Schwab, Hans-Martin Rutten, Marcel C. M. van Sambeek, Marc R. H. M. Wu, Min Lopata, Richard G. P. J Biomed Opt Imaging SIGNIFICANCE: Physics-based simulations of photoacoustic (PA) signals are used to validate new methods, to characterize PA setups and to generate training datasets for machine learning. However, a thoroughly validated PA simulation toolchain that can simulate realistic images is still lacking. AIM: A quantitative toolchain was developed to model PA image acquisition in complex tissues, by simulating both the optical fluence and the acoustic wave propagation. APPROACH: Sampling techniques were developed to decrease artifacts in acoustic simulations. The performance of the simulations was analyzed by measuring the point spread function (PSF) and using a rotatable three-channel phantom, filled with cholesterol, a human carotid plaque sample, and porcine blood. Ex vivo human plaque samples were simulated to validate the methods in more complex tissues. RESULTS: The sampling techniques could enhance the quality of the simulated PA images effectively. The resolution and intensity of the PSF in the turbid medium matched the experimental data well. Overall, the appearance, signal-to-noise ratio and speckle of the images could be simulated accurately. CONCLUSIONS: A PA toolchain was developed and validated, and the results indicate a great potential of PA simulations in more complex and heterogeneous media. Society of Photo-Optical Instrumentation Engineers 2022-09-14 2022-09 /pmc/articles/PMC9470848/ /pubmed/36104838 http://dx.doi.org/10.1117/1.JBO.27.9.096005 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Imaging
Muller, Jan-Willem
Arabul, Mustafa Ü.
Schwab, Hans-Martin
Rutten, Marcel C. M.
van Sambeek, Marc R. H. M.
Wu, Min
Lopata, Richard G. P.
Modeling toolchain for realistic simulation of photoacoustic data acquisition
title Modeling toolchain for realistic simulation of photoacoustic data acquisition
title_full Modeling toolchain for realistic simulation of photoacoustic data acquisition
title_fullStr Modeling toolchain for realistic simulation of photoacoustic data acquisition
title_full_unstemmed Modeling toolchain for realistic simulation of photoacoustic data acquisition
title_short Modeling toolchain for realistic simulation of photoacoustic data acquisition
title_sort modeling toolchain for realistic simulation of photoacoustic data acquisition
topic Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9470848/
https://www.ncbi.nlm.nih.gov/pubmed/36104838
http://dx.doi.org/10.1117/1.JBO.27.9.096005
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