Cargando…
Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles
OBJECTIVE: To explore the feasibility of a deep learning three-dimensional (3D) V-Net convolutional neural network to construct high-resolution computed tomography (HRCT)-based auditory ossicle structure recognition and segmentation models. METHODS: The temporal bone HRCT images of 158 patients were...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9470864/ https://www.ncbi.nlm.nih.gov/pubmed/36120083 http://dx.doi.org/10.3389/fninf.2022.937891 |
_version_ | 1784788933870092288 |
---|---|
author | Wang, Xing-Rui Ma, Xi Jin, Liu-Xu Gao, Yan-Jun Xue, Yong-Jie Li, Jing-Long Bai, Wei-Xian Han, Miao-Fei Zhou, Qing Shi, Feng Wang, Jing |
author_facet | Wang, Xing-Rui Ma, Xi Jin, Liu-Xu Gao, Yan-Jun Xue, Yong-Jie Li, Jing-Long Bai, Wei-Xian Han, Miao-Fei Zhou, Qing Shi, Feng Wang, Jing |
author_sort | Wang, Xing-Rui |
collection | PubMed |
description | OBJECTIVE: To explore the feasibility of a deep learning three-dimensional (3D) V-Net convolutional neural network to construct high-resolution computed tomography (HRCT)-based auditory ossicle structure recognition and segmentation models. METHODS: The temporal bone HRCT images of 158 patients were collected retrospectively, and the malleus, incus, and stapes were manually segmented. The 3D V-Net and U-Net convolutional neural networks were selected as the deep learning methods for segmenting the auditory ossicles. The temporal bone images were randomized into a training set (126 cases), a test set (16 cases), and a validation set (16 cases). Taking the results of manual segmentation as a control, the segmentation results of each model were compared. RESULTS: The Dice similarity coefficients (DSCs) of the malleus, incus, and stapes, which were automatically segmented with a 3D V-Net convolutional neural network and manually segmented from the HRCT images, were 0.920 ± 0.014, 0.925 ± 0.014, and 0.835 ± 0.035, respectively. The average surface distance (ASD) was 0.257 ± 0.054, 0.236 ± 0.047, and 0.258 ± 0.077, respectively. The Hausdorff distance (HD) 95 was 1.016 ± 0.080, 1.000 ± 0.000, and 1.027 ± 0.102, respectively. The DSCs of the malleus, incus, and stapes, which were automatically segmented using the 3D U-Net convolutional neural network and manually segmented from the HRCT images, were 0.876 ± 0.025, 0.889 ± 0.023, and 0.758 ± 0.044, respectively. The ASD was 0.439 ± 0.208, 0.361 ± 0.077, and 0.433 ± 0.108, respectively. The HD 95 was 1.361 ± 0.872, 1.174 ± 0.350, and 1.455 ± 0.618, respectively. As these results demonstrated, there was a statistically significant difference between the two groups (P < 0.001). CONCLUSION: The 3D V-Net convolutional neural network yielded automatic recognition and segmentation of the auditory ossicles and produced similar accuracy to manual segmentation results. |
format | Online Article Text |
id | pubmed-9470864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94708642022-09-15 Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles Wang, Xing-Rui Ma, Xi Jin, Liu-Xu Gao, Yan-Jun Xue, Yong-Jie Li, Jing-Long Bai, Wei-Xian Han, Miao-Fei Zhou, Qing Shi, Feng Wang, Jing Front Neuroinform Neuroscience OBJECTIVE: To explore the feasibility of a deep learning three-dimensional (3D) V-Net convolutional neural network to construct high-resolution computed tomography (HRCT)-based auditory ossicle structure recognition and segmentation models. METHODS: The temporal bone HRCT images of 158 patients were collected retrospectively, and the malleus, incus, and stapes were manually segmented. The 3D V-Net and U-Net convolutional neural networks were selected as the deep learning methods for segmenting the auditory ossicles. The temporal bone images were randomized into a training set (126 cases), a test set (16 cases), and a validation set (16 cases). Taking the results of manual segmentation as a control, the segmentation results of each model were compared. RESULTS: The Dice similarity coefficients (DSCs) of the malleus, incus, and stapes, which were automatically segmented with a 3D V-Net convolutional neural network and manually segmented from the HRCT images, were 0.920 ± 0.014, 0.925 ± 0.014, and 0.835 ± 0.035, respectively. The average surface distance (ASD) was 0.257 ± 0.054, 0.236 ± 0.047, and 0.258 ± 0.077, respectively. The Hausdorff distance (HD) 95 was 1.016 ± 0.080, 1.000 ± 0.000, and 1.027 ± 0.102, respectively. The DSCs of the malleus, incus, and stapes, which were automatically segmented using the 3D U-Net convolutional neural network and manually segmented from the HRCT images, were 0.876 ± 0.025, 0.889 ± 0.023, and 0.758 ± 0.044, respectively. The ASD was 0.439 ± 0.208, 0.361 ± 0.077, and 0.433 ± 0.108, respectively. The HD 95 was 1.361 ± 0.872, 1.174 ± 0.350, and 1.455 ± 0.618, respectively. As these results demonstrated, there was a statistically significant difference between the two groups (P < 0.001). CONCLUSION: The 3D V-Net convolutional neural network yielded automatic recognition and segmentation of the auditory ossicles and produced similar accuracy to manual segmentation results. Frontiers Media S.A. 2022-08-31 /pmc/articles/PMC9470864/ /pubmed/36120083 http://dx.doi.org/10.3389/fninf.2022.937891 Text en Copyright © 2022 Wang, Ma, Jin, Gao, Xue, Li, Bai, Han, Zhou, Shi and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Wang, Xing-Rui Ma, Xi Jin, Liu-Xu Gao, Yan-Jun Xue, Yong-Jie Li, Jing-Long Bai, Wei-Xian Han, Miao-Fei Zhou, Qing Shi, Feng Wang, Jing Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title | Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title_full | Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title_fullStr | Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title_full_unstemmed | Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title_short | Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles |
title_sort | application value of a deep learning method based on a 3d v-net convolutional neural network in the recognition and segmentation of the auditory ossicles |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9470864/ https://www.ncbi.nlm.nih.gov/pubmed/36120083 http://dx.doi.org/10.3389/fninf.2022.937891 |
work_keys_str_mv | AT wangxingrui applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT maxi applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT jinliuxu applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT gaoyanjun applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT xueyongjie applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT lijinglong applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT baiweixian applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT hanmiaofei applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT zhouqing applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT shifeng applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles AT wangjing applicationvalueofadeeplearningmethodbasedona3dvnetconvolutionalneuralnetworkintherecognitionandsegmentationoftheauditoryossicles |