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Gravity filtration of environmental DNA: A simple, fast, and power-free method

Filtration is required during the collection of trace amounts of environmental DNA (eDNA) from water samples to achieve a concentration sufficient for downstream molecular experiments. To date, collected water samples have been filtered by humans or electric power using various instruments. We devel...

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Detalles Bibliográficos
Autores principales: Oka, Shin-ichiro, Miya, Masaki, Sado, Tetsuya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9472067/
https://www.ncbi.nlm.nih.gov/pubmed/36117674
http://dx.doi.org/10.1016/j.mex.2022.101838
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author Oka, Shin-ichiro
Miya, Masaki
Sado, Tetsuya
author_facet Oka, Shin-ichiro
Miya, Masaki
Sado, Tetsuya
author_sort Oka, Shin-ichiro
collection PubMed
description Filtration is required during the collection of trace amounts of environmental DNA (eDNA) from water samples to achieve a concentration sufficient for downstream molecular experiments. To date, collected water samples have been filtered by humans or electric power using various instruments. We developed a simple gravity filtration system that does not need for an external force. The system comprises a plastic bag filled with a water sample (1 L), a filter cartridge, and a long plastic tube (e.g., 2 m). When hung at a height equal to the tube length, this filtration unit can enable power-free collection and concentration of eDNA at any remote location within a reasonable time (10–60 min). • A simple, rapid, power-free, practical filtration system for environmental DNA analysis is reported. • If there is a place to hang the filtration system, filtration can be performed anywhere. • The filtration speed increased when the system was hung higher.
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spelling pubmed-94720672022-09-15 Gravity filtration of environmental DNA: A simple, fast, and power-free method Oka, Shin-ichiro Miya, Masaki Sado, Tetsuya MethodsX Method Article Filtration is required during the collection of trace amounts of environmental DNA (eDNA) from water samples to achieve a concentration sufficient for downstream molecular experiments. To date, collected water samples have been filtered by humans or electric power using various instruments. We developed a simple gravity filtration system that does not need for an external force. The system comprises a plastic bag filled with a water sample (1 L), a filter cartridge, and a long plastic tube (e.g., 2 m). When hung at a height equal to the tube length, this filtration unit can enable power-free collection and concentration of eDNA at any remote location within a reasonable time (10–60 min). • A simple, rapid, power-free, practical filtration system for environmental DNA analysis is reported. • If there is a place to hang the filtration system, filtration can be performed anywhere. • The filtration speed increased when the system was hung higher. Elsevier 2022-08-30 /pmc/articles/PMC9472067/ /pubmed/36117674 http://dx.doi.org/10.1016/j.mex.2022.101838 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Method Article
Oka, Shin-ichiro
Miya, Masaki
Sado, Tetsuya
Gravity filtration of environmental DNA: A simple, fast, and power-free method
title Gravity filtration of environmental DNA: A simple, fast, and power-free method
title_full Gravity filtration of environmental DNA: A simple, fast, and power-free method
title_fullStr Gravity filtration of environmental DNA: A simple, fast, and power-free method
title_full_unstemmed Gravity filtration of environmental DNA: A simple, fast, and power-free method
title_short Gravity filtration of environmental DNA: A simple, fast, and power-free method
title_sort gravity filtration of environmental dna: a simple, fast, and power-free method
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9472067/
https://www.ncbi.nlm.nih.gov/pubmed/36117674
http://dx.doi.org/10.1016/j.mex.2022.101838
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