Cargando…
Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy
PURPOSE: Type 2 diabetes mellitus (T2DM) increases the incidence of diabetic nephropathy (DN) and eventually progresses to end-stage renal disease. Circular RNAs (circRNAs) are a class of non-coding RNAs that are promising as diagnostic biomarkers and therapeutic targets for human diseases. The aim...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9473550/ https://www.ncbi.nlm.nih.gov/pubmed/36118796 http://dx.doi.org/10.2147/DMSO.S384054 |
_version_ | 1784789527621009408 |
---|---|
author | Zhang, Keke Wan, Xinxing Khan, Md Asaduzzaman Sun, Xiaoying Yi, Xuan Wang, Zhouqi Chen, Ke Peng, Lin |
author_facet | Zhang, Keke Wan, Xinxing Khan, Md Asaduzzaman Sun, Xiaoying Yi, Xuan Wang, Zhouqi Chen, Ke Peng, Lin |
author_sort | Zhang, Keke |
collection | PubMed |
description | PURPOSE: Type 2 diabetes mellitus (T2DM) increases the incidence of diabetic nephropathy (DN) and eventually progresses to end-stage renal disease. Circular RNAs (circRNAs) are a class of non-coding RNAs that are promising as diagnostic biomarkers and therapeutic targets for human diseases. The aim of this study was to analyze the differential expression of circRNAs (DECs) in peripheral blood from patients with early type 2 diabetic nephropathy (ET2DN), T2DM and controls, which will facilitate to discover some new biomarkers for ET2DN. PATIENTS AND METHODS: Twenty ET2DN patients, 20 T2DM patients, and 20 normal controls were included in this study. Blood samples from 3 random subjects of age- and sex-matched patients in each group, respectively, were used to detect circRNA expression profiles by circRNA microarray, and the circRNA expression of remaining subjects was validated by real-time quantitative polymerase chain reaction (qRT-PCR). Further functional assessment was performed by bioinformatic tools. RESULTS: There were 586 DECs in ET2DN vs T2DM group (249 circRNAs were upregulated and 337 circRNAs were downregulated); 176 circRNAs were upregulated and 101 circRNAs were downregulated in T2DM vs control group; 57 circRNAs were upregulated and 5 circRNAs were downregulated in ET2DN vs control group. The functional and pathway enrichment of DECs were analyzed by GO and KEGG. qRT-PCR results revealed that hsa_circ_0001831 and hsa_circ_0000867 were significantly upregulated in ET2DN group compared to both of T2DM and control group. The ROC curve demonstrated that hsa_circ_0001831 and hsa_circ_0000867 have high sensitivity and specificity associated with ET2DN. CONCLUSION: Our study showed the expression profiles of circRNAs in ET2DN patients and demonstrated that hsa_circ_0001831 and hsa_circ_0000867 can be used as novel diagnostic biomarkers for ET2DN. |
format | Online Article Text |
id | pubmed-9473550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-94735502022-09-15 Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy Zhang, Keke Wan, Xinxing Khan, Md Asaduzzaman Sun, Xiaoying Yi, Xuan Wang, Zhouqi Chen, Ke Peng, Lin Diabetes Metab Syndr Obes Original Research PURPOSE: Type 2 diabetes mellitus (T2DM) increases the incidence of diabetic nephropathy (DN) and eventually progresses to end-stage renal disease. Circular RNAs (circRNAs) are a class of non-coding RNAs that are promising as diagnostic biomarkers and therapeutic targets for human diseases. The aim of this study was to analyze the differential expression of circRNAs (DECs) in peripheral blood from patients with early type 2 diabetic nephropathy (ET2DN), T2DM and controls, which will facilitate to discover some new biomarkers for ET2DN. PATIENTS AND METHODS: Twenty ET2DN patients, 20 T2DM patients, and 20 normal controls were included in this study. Blood samples from 3 random subjects of age- and sex-matched patients in each group, respectively, were used to detect circRNA expression profiles by circRNA microarray, and the circRNA expression of remaining subjects was validated by real-time quantitative polymerase chain reaction (qRT-PCR). Further functional assessment was performed by bioinformatic tools. RESULTS: There were 586 DECs in ET2DN vs T2DM group (249 circRNAs were upregulated and 337 circRNAs were downregulated); 176 circRNAs were upregulated and 101 circRNAs were downregulated in T2DM vs control group; 57 circRNAs were upregulated and 5 circRNAs were downregulated in ET2DN vs control group. The functional and pathway enrichment of DECs were analyzed by GO and KEGG. qRT-PCR results revealed that hsa_circ_0001831 and hsa_circ_0000867 were significantly upregulated in ET2DN group compared to both of T2DM and control group. The ROC curve demonstrated that hsa_circ_0001831 and hsa_circ_0000867 have high sensitivity and specificity associated with ET2DN. CONCLUSION: Our study showed the expression profiles of circRNAs in ET2DN patients and demonstrated that hsa_circ_0001831 and hsa_circ_0000867 can be used as novel diagnostic biomarkers for ET2DN. Dove 2022-09-10 /pmc/articles/PMC9473550/ /pubmed/36118796 http://dx.doi.org/10.2147/DMSO.S384054 Text en © 2022 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Keke Wan, Xinxing Khan, Md Asaduzzaman Sun, Xiaoying Yi, Xuan Wang, Zhouqi Chen, Ke Peng, Lin Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title | Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title_full | Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title_fullStr | Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title_full_unstemmed | Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title_short | Peripheral Blood circRNA Microarray Profiling Identities hsa_circ_0001831 and hsa_circ_0000867 as Two Novel circRNA Biomarkers for Early Type 2 Diabetic Nephropathy |
title_sort | peripheral blood circrna microarray profiling identities hsa_circ_0001831 and hsa_circ_0000867 as two novel circrna biomarkers for early type 2 diabetic nephropathy |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9473550/ https://www.ncbi.nlm.nih.gov/pubmed/36118796 http://dx.doi.org/10.2147/DMSO.S384054 |
work_keys_str_mv | AT zhangkeke peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT wanxinxing peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT khanmdasaduzzaman peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT sunxiaoying peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT yixuan peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT wangzhouqi peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT chenke peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy AT penglin peripheralbloodcircrnamicroarrayprofilingidentitieshsacirc0001831andhsacirc0000867astwonovelcircrnabiomarkersforearlytype2diabeticnephropathy |