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Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times

While early genetic and low-resolution structural observations suggested that extracellular conductive filaments on metal-reducing organisms such as Geobacter were composed of type IV pili, it has now been established that bacterial c-type cytochromes can polymerize to form extracellular filaments c...

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Autores principales: Wang, Fengbin, Chan, Chi Ho, Suciu, Victor, Mustafa, Khawla, Ammend, Madeline, Si, Dong, Hochbaum, Allon I, Egelman, Edward H, Bond, Daniel R
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9473688/
https://www.ncbi.nlm.nih.gov/pubmed/36062910
http://dx.doi.org/10.7554/eLife.81551
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author Wang, Fengbin
Chan, Chi Ho
Suciu, Victor
Mustafa, Khawla
Ammend, Madeline
Si, Dong
Hochbaum, Allon I
Egelman, Edward H
Bond, Daniel R
author_facet Wang, Fengbin
Chan, Chi Ho
Suciu, Victor
Mustafa, Khawla
Ammend, Madeline
Si, Dong
Hochbaum, Allon I
Egelman, Edward H
Bond, Daniel R
author_sort Wang, Fengbin
collection PubMed
description While early genetic and low-resolution structural observations suggested that extracellular conductive filaments on metal-reducing organisms such as Geobacter were composed of type IV pili, it has now been established that bacterial c-type cytochromes can polymerize to form extracellular filaments capable of long-range electron transport. Atomic structures exist for two such cytochrome filaments, formed from the hexaheme cytochrome OmcS and the tetraheme cytochrome OmcE. Due to the highly conserved heme packing within the central OmcS and OmcE cores, and shared pattern of heme coordination between subunits, it has been suggested that these polymers have a common origin. We have now used cryo-electron microscopy (cryo-EM) to determine the structure of a third extracellular filament, formed from the Geobacter sulfurreducens octaheme cytochrome, OmcZ. In contrast to the linear heme chains in OmcS and OmcE from the same organism, the packing of hemes, heme:heme angles, and between-subunit heme coordination is quite different in OmcZ. A branched heme arrangement within OmcZ leads to a highly surface exposed heme in every subunit, which may account for the formation of conductive biofilm networks, and explain the higher measured conductivity of OmcZ filaments. This new structural evidence suggests that conductive cytochrome polymers arose independently on more than one occasion from different ancestral multiheme proteins.
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spelling pubmed-94736882022-09-15 Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times Wang, Fengbin Chan, Chi Ho Suciu, Victor Mustafa, Khawla Ammend, Madeline Si, Dong Hochbaum, Allon I Egelman, Edward H Bond, Daniel R eLife Biochemistry and Chemical Biology While early genetic and low-resolution structural observations suggested that extracellular conductive filaments on metal-reducing organisms such as Geobacter were composed of type IV pili, it has now been established that bacterial c-type cytochromes can polymerize to form extracellular filaments capable of long-range electron transport. Atomic structures exist for two such cytochrome filaments, formed from the hexaheme cytochrome OmcS and the tetraheme cytochrome OmcE. Due to the highly conserved heme packing within the central OmcS and OmcE cores, and shared pattern of heme coordination between subunits, it has been suggested that these polymers have a common origin. We have now used cryo-electron microscopy (cryo-EM) to determine the structure of a third extracellular filament, formed from the Geobacter sulfurreducens octaheme cytochrome, OmcZ. In contrast to the linear heme chains in OmcS and OmcE from the same organism, the packing of hemes, heme:heme angles, and between-subunit heme coordination is quite different in OmcZ. A branched heme arrangement within OmcZ leads to a highly surface exposed heme in every subunit, which may account for the formation of conductive biofilm networks, and explain the higher measured conductivity of OmcZ filaments. This new structural evidence suggests that conductive cytochrome polymers arose independently on more than one occasion from different ancestral multiheme proteins. eLife Sciences Publications, Ltd 2022-09-05 /pmc/articles/PMC9473688/ /pubmed/36062910 http://dx.doi.org/10.7554/eLife.81551 Text en © 2022, Wang et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Biochemistry and Chemical Biology
Wang, Fengbin
Chan, Chi Ho
Suciu, Victor
Mustafa, Khawla
Ammend, Madeline
Si, Dong
Hochbaum, Allon I
Egelman, Edward H
Bond, Daniel R
Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title_full Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title_fullStr Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title_full_unstemmed Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title_short Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
title_sort structure of geobacter omcz filaments suggests extracellular cytochrome polymers evolved independently multiple times
topic Biochemistry and Chemical Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9473688/
https://www.ncbi.nlm.nih.gov/pubmed/36062910
http://dx.doi.org/10.7554/eLife.81551
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