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N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation

Medical image segmentation is an essential component of computer-aided diagnosis (CAD) systems. Thyroid nodule segmentation using ultrasound images is a necessary step for the early diagnosis of thyroid diseases. An encoder-decoder based deep convolutional neural network (DCNN), like U-Net architect...

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Autores principales: Nie, Xingqing, Zhou, Xiaogen, Tong, Tong, Lin, Xingtao, Wang, Luoyan, Zheng, Haonan, Li, Jing, Xue, Ensheng, Chen, Shun, Zheng, Meijuan, Chen, Cong, Du, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9475170/
https://www.ncbi.nlm.nih.gov/pubmed/36117632
http://dx.doi.org/10.3389/fnins.2022.872601
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author Nie, Xingqing
Zhou, Xiaogen
Tong, Tong
Lin, Xingtao
Wang, Luoyan
Zheng, Haonan
Li, Jing
Xue, Ensheng
Chen, Shun
Zheng, Meijuan
Chen, Cong
Du, Min
author_facet Nie, Xingqing
Zhou, Xiaogen
Tong, Tong
Lin, Xingtao
Wang, Luoyan
Zheng, Haonan
Li, Jing
Xue, Ensheng
Chen, Shun
Zheng, Meijuan
Chen, Cong
Du, Min
author_sort Nie, Xingqing
collection PubMed
description Medical image segmentation is an essential component of computer-aided diagnosis (CAD) systems. Thyroid nodule segmentation using ultrasound images is a necessary step for the early diagnosis of thyroid diseases. An encoder-decoder based deep convolutional neural network (DCNN), like U-Net architecture and its variants, has been extensively used to deal with medical image segmentation tasks. In this article, we propose a novel N-shape dense fully convolutional neural network for medical image segmentation, referred to as N-Net. The proposed framework is composed of three major components: a multi-scale input layer, an attention guidance module, and an innovative stackable dilated convolution (SDC) block. First, we apply the multi-scale input layer to construct an image pyramid, which achieves multi-level receiver field sizes and obtains rich feature representation. After that, the U-shape convolutional network is employed as the backbone structure. Moreover, we use the attention guidance module to filter the features before several skip connections, which can transfer structural information from previous feature maps to the following layers. This module can also remove noise and reduce the negative impact of the background. Finally, we propose a stackable dilated convolution (SDC) block, which is able to capture deep semantic features that may be lost in bilinear upsampling. We have evaluated the proposed N-Net framework on a thyroid nodule ultrasound image dataset (called the TNUI-2021 dataset) and the DDTI publicly available dataset. The experimental results show that our N-Net model outperforms several state-of-the-art methods in the thyroid nodule segmentation tasks.
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spelling pubmed-94751702022-09-16 N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation Nie, Xingqing Zhou, Xiaogen Tong, Tong Lin, Xingtao Wang, Luoyan Zheng, Haonan Li, Jing Xue, Ensheng Chen, Shun Zheng, Meijuan Chen, Cong Du, Min Front Neurosci Neuroscience Medical image segmentation is an essential component of computer-aided diagnosis (CAD) systems. Thyroid nodule segmentation using ultrasound images is a necessary step for the early diagnosis of thyroid diseases. An encoder-decoder based deep convolutional neural network (DCNN), like U-Net architecture and its variants, has been extensively used to deal with medical image segmentation tasks. In this article, we propose a novel N-shape dense fully convolutional neural network for medical image segmentation, referred to as N-Net. The proposed framework is composed of three major components: a multi-scale input layer, an attention guidance module, and an innovative stackable dilated convolution (SDC) block. First, we apply the multi-scale input layer to construct an image pyramid, which achieves multi-level receiver field sizes and obtains rich feature representation. After that, the U-shape convolutional network is employed as the backbone structure. Moreover, we use the attention guidance module to filter the features before several skip connections, which can transfer structural information from previous feature maps to the following layers. This module can also remove noise and reduce the negative impact of the background. Finally, we propose a stackable dilated convolution (SDC) block, which is able to capture deep semantic features that may be lost in bilinear upsampling. We have evaluated the proposed N-Net framework on a thyroid nodule ultrasound image dataset (called the TNUI-2021 dataset) and the DDTI publicly available dataset. The experimental results show that our N-Net model outperforms several state-of-the-art methods in the thyroid nodule segmentation tasks. Frontiers Media S.A. 2022-09-01 /pmc/articles/PMC9475170/ /pubmed/36117632 http://dx.doi.org/10.3389/fnins.2022.872601 Text en Copyright © 2022 Nie, Zhou, Tong, Lin, Wang, Zheng, Li, Xue, Chen, Zheng, Chen and Du. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Nie, Xingqing
Zhou, Xiaogen
Tong, Tong
Lin, Xingtao
Wang, Luoyan
Zheng, Haonan
Li, Jing
Xue, Ensheng
Chen, Shun
Zheng, Meijuan
Chen, Cong
Du, Min
N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title_full N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title_fullStr N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title_full_unstemmed N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title_short N-Net: A novel dense fully convolutional neural network for thyroid nodule segmentation
title_sort n-net: a novel dense fully convolutional neural network for thyroid nodule segmentation
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9475170/
https://www.ncbi.nlm.nih.gov/pubmed/36117632
http://dx.doi.org/10.3389/fnins.2022.872601
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