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Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by b...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477275/ https://www.ncbi.nlm.nih.gov/pubmed/36107960 http://dx.doi.org/10.1371/journal.pone.0274530 |
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author | Sun, Peixia Huang, Chuang Zhang, Liping Wu, Dan Zhang, Wei Yu, Shuang Fu, Genying Cheng, Shanhan Wang, Zhiwei Deng, Qin Zhu, Guopeng Liu, Pingwu |
author_facet | Sun, Peixia Huang, Chuang Zhang, Liping Wu, Dan Zhang, Wei Yu, Shuang Fu, Genying Cheng, Shanhan Wang, Zhiwei Deng, Qin Zhu, Guopeng Liu, Pingwu |
author_sort | Sun, Peixia |
collection | PubMed |
description | Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by biological microscope, and the differentially expressed genes related to trichomes formation were screened through transcriptome sequencing. The results showed that the number of leaves trichomes was reduced by 34.7% at low temperature compared with room temperature. A total of 661 differentially expression genes effecting trichomes formation were identified at the CT vs C, LCT vs LC, CT vs LCT. Several differentially expression genes from every comparison group were enriched in plant hormone signal transduction and amino acid biosynthesis pathway. Combined with the central genes obtained by WGCNA analysis, five candidate genes Bra029778, Bra026393, Bra030270, Bra037264 and Bra009655 were screened. qRT-PCR analysis verified that the gene expression differences were in line with the trend of transcriptome data. This study not only found possible new key genes and laid a foundation for revealing the molecular mechanism regulating the formation of trichome in Chinese cabbage, but also provided a new way to study plant surface trichomes. |
format | Online Article Text |
id | pubmed-9477275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-94772752022-09-16 Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage Sun, Peixia Huang, Chuang Zhang, Liping Wu, Dan Zhang, Wei Yu, Shuang Fu, Genying Cheng, Shanhan Wang, Zhiwei Deng, Qin Zhu, Guopeng Liu, Pingwu PLoS One Research Article Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by biological microscope, and the differentially expressed genes related to trichomes formation were screened through transcriptome sequencing. The results showed that the number of leaves trichomes was reduced by 34.7% at low temperature compared with room temperature. A total of 661 differentially expression genes effecting trichomes formation were identified at the CT vs C, LCT vs LC, CT vs LCT. Several differentially expression genes from every comparison group were enriched in plant hormone signal transduction and amino acid biosynthesis pathway. Combined with the central genes obtained by WGCNA analysis, five candidate genes Bra029778, Bra026393, Bra030270, Bra037264 and Bra009655 were screened. qRT-PCR analysis verified that the gene expression differences were in line with the trend of transcriptome data. This study not only found possible new key genes and laid a foundation for revealing the molecular mechanism regulating the formation of trichome in Chinese cabbage, but also provided a new way to study plant surface trichomes. Public Library of Science 2022-09-15 /pmc/articles/PMC9477275/ /pubmed/36107960 http://dx.doi.org/10.1371/journal.pone.0274530 Text en © 2022 Sun et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sun, Peixia Huang, Chuang Zhang, Liping Wu, Dan Zhang, Wei Yu, Shuang Fu, Genying Cheng, Shanhan Wang, Zhiwei Deng, Qin Zhu, Guopeng Liu, Pingwu Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title | Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title_full | Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title_fullStr | Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title_full_unstemmed | Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title_short | Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage |
title_sort | insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in chinese cabbage |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477275/ https://www.ncbi.nlm.nih.gov/pubmed/36107960 http://dx.doi.org/10.1371/journal.pone.0274530 |
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