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Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage

Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by b...

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Autores principales: Sun, Peixia, Huang, Chuang, Zhang, Liping, Wu, Dan, Zhang, Wei, Yu, Shuang, Fu, Genying, Cheng, Shanhan, Wang, Zhiwei, Deng, Qin, Zhu, Guopeng, Liu, Pingwu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477275/
https://www.ncbi.nlm.nih.gov/pubmed/36107960
http://dx.doi.org/10.1371/journal.pone.0274530
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author Sun, Peixia
Huang, Chuang
Zhang, Liping
Wu, Dan
Zhang, Wei
Yu, Shuang
Fu, Genying
Cheng, Shanhan
Wang, Zhiwei
Deng, Qin
Zhu, Guopeng
Liu, Pingwu
author_facet Sun, Peixia
Huang, Chuang
Zhang, Liping
Wu, Dan
Zhang, Wei
Yu, Shuang
Fu, Genying
Cheng, Shanhan
Wang, Zhiwei
Deng, Qin
Zhu, Guopeng
Liu, Pingwu
author_sort Sun, Peixia
collection PubMed
description Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by biological microscope, and the differentially expressed genes related to trichomes formation were screened through transcriptome sequencing. The results showed that the number of leaves trichomes was reduced by 34.7% at low temperature compared with room temperature. A total of 661 differentially expression genes effecting trichomes formation were identified at the CT vs C, LCT vs LC, CT vs LCT. Several differentially expression genes from every comparison group were enriched in plant hormone signal transduction and amino acid biosynthesis pathway. Combined with the central genes obtained by WGCNA analysis, five candidate genes Bra029778, Bra026393, Bra030270, Bra037264 and Bra009655 were screened. qRT-PCR analysis verified that the gene expression differences were in line with the trend of transcriptome data. This study not only found possible new key genes and laid a foundation for revealing the molecular mechanism regulating the formation of trichome in Chinese cabbage, but also provided a new way to study plant surface trichomes.
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spelling pubmed-94772752022-09-16 Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage Sun, Peixia Huang, Chuang Zhang, Liping Wu, Dan Zhang, Wei Yu, Shuang Fu, Genying Cheng, Shanhan Wang, Zhiwei Deng, Qin Zhu, Guopeng Liu, Pingwu PLoS One Research Article Trichome is important for help plant resist adversity and external damage. However, it often affects the appearance and taste of vegetables. In the present study, the trichome density of leaves from two Chinese cabbage cultivars with and without trichomes treated at low temperature are analyzed by biological microscope, and the differentially expressed genes related to trichomes formation were screened through transcriptome sequencing. The results showed that the number of leaves trichomes was reduced by 34.7% at low temperature compared with room temperature. A total of 661 differentially expression genes effecting trichomes formation were identified at the CT vs C, LCT vs LC, CT vs LCT. Several differentially expression genes from every comparison group were enriched in plant hormone signal transduction and amino acid biosynthesis pathway. Combined with the central genes obtained by WGCNA analysis, five candidate genes Bra029778, Bra026393, Bra030270, Bra037264 and Bra009655 were screened. qRT-PCR analysis verified that the gene expression differences were in line with the trend of transcriptome data. This study not only found possible new key genes and laid a foundation for revealing the molecular mechanism regulating the formation of trichome in Chinese cabbage, but also provided a new way to study plant surface trichomes. Public Library of Science 2022-09-15 /pmc/articles/PMC9477275/ /pubmed/36107960 http://dx.doi.org/10.1371/journal.pone.0274530 Text en © 2022 Sun et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sun, Peixia
Huang, Chuang
Zhang, Liping
Wu, Dan
Zhang, Wei
Yu, Shuang
Fu, Genying
Cheng, Shanhan
Wang, Zhiwei
Deng, Qin
Zhu, Guopeng
Liu, Pingwu
Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title_full Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title_fullStr Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title_full_unstemmed Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title_short Insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in Chinese cabbage
title_sort insight into the effect of low temperature treatment on trichome density and related differentially expressed genes in chinese cabbage
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477275/
https://www.ncbi.nlm.nih.gov/pubmed/36107960
http://dx.doi.org/10.1371/journal.pone.0274530
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