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Sample pooling: burden or solution?

BACKGROUND: Pool-testing strategies combine samples from multiple people and test them as a group. A pool-testing approach may shorten the screening time and increase the test rate during times of limited test availability and inadequate reporting speed. Pool testing has been effectively used for a...

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Autores principales: Grobe, Nadja, Cherif, Alhaji, Wang, Xiaoling, Dong, Zijun, Kotanko, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477502/
https://www.ncbi.nlm.nih.gov/pubmed/33878507
http://dx.doi.org/10.1016/j.cmi.2021.04.007
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author Grobe, Nadja
Cherif, Alhaji
Wang, Xiaoling
Dong, Zijun
Kotanko, Peter
author_facet Grobe, Nadja
Cherif, Alhaji
Wang, Xiaoling
Dong, Zijun
Kotanko, Peter
author_sort Grobe, Nadja
collection PubMed
description BACKGROUND: Pool-testing strategies combine samples from multiple people and test them as a group. A pool-testing approach may shorten the screening time and increase the test rate during times of limited test availability and inadequate reporting speed. Pool testing has been effectively used for a wide variety of infectious disease screening settings. Historically, it originated from serological testing in syphilis. During the current coronavirus disease 2019 (COVID-19) pandemic, pool testing is considered across the globe to inform opening strategies and to monitor infection rates after the implementation of interventions. AIMS: This narrative review aims to provide a comprehensive overview of the global efforts to implement pool testing, specifically for COVID-19 screening. SOURCES: Data were retrieved from a detailed search for peer-reviewed articles and preprint reports using Medline/PubMed, medRxiv, Web of Science, and Google up to 21st March 2021, using search terms “pool testing”, “viral”, “serum”, “SARS-CoV-2” and “COVID-19”. CONTENT: This review summarizes the history and theory of pool testing. We identified numerous peer-reviewed articles that describe specific details and practical implementation of pool testing. Successful examples as well as limitations of pool testing, in general and specifically related to the detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA and antibodies, are reviewed. While promising, significant operational, pre-analytical, logistical, and economic challenges need to be overcome to advance pool testing. IMPLICATIONS: The theory of pool testing is well understood and numerous successful examples from the past are available. Operationalization of pool testing requires sophisticated processes that can be adapted to the local medical circumstances. Special attention needs to be paid to sample collection, sample pooling, and strategies to avoid re-sampling.
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spelling pubmed-94775022022-09-15 Sample pooling: burden or solution? Grobe, Nadja Cherif, Alhaji Wang, Xiaoling Dong, Zijun Kotanko, Peter Clin Microbiol Infect Article BACKGROUND: Pool-testing strategies combine samples from multiple people and test them as a group. A pool-testing approach may shorten the screening time and increase the test rate during times of limited test availability and inadequate reporting speed. Pool testing has been effectively used for a wide variety of infectious disease screening settings. Historically, it originated from serological testing in syphilis. During the current coronavirus disease 2019 (COVID-19) pandemic, pool testing is considered across the globe to inform opening strategies and to monitor infection rates after the implementation of interventions. AIMS: This narrative review aims to provide a comprehensive overview of the global efforts to implement pool testing, specifically for COVID-19 screening. SOURCES: Data were retrieved from a detailed search for peer-reviewed articles and preprint reports using Medline/PubMed, medRxiv, Web of Science, and Google up to 21st March 2021, using search terms “pool testing”, “viral”, “serum”, “SARS-CoV-2” and “COVID-19”. CONTENT: This review summarizes the history and theory of pool testing. We identified numerous peer-reviewed articles that describe specific details and practical implementation of pool testing. Successful examples as well as limitations of pool testing, in general and specifically related to the detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA and antibodies, are reviewed. While promising, significant operational, pre-analytical, logistical, and economic challenges need to be overcome to advance pool testing. IMPLICATIONS: The theory of pool testing is well understood and numerous successful examples from the past are available. Operationalization of pool testing requires sophisticated processes that can be adapted to the local medical circumstances. Special attention needs to be paid to sample collection, sample pooling, and strategies to avoid re-sampling. 2021-09 2021-04-18 /pmc/articles/PMC9477502/ /pubmed/33878507 http://dx.doi.org/10.1016/j.cmi.2021.04.007 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Grobe, Nadja
Cherif, Alhaji
Wang, Xiaoling
Dong, Zijun
Kotanko, Peter
Sample pooling: burden or solution?
title Sample pooling: burden or solution?
title_full Sample pooling: burden or solution?
title_fullStr Sample pooling: burden or solution?
title_full_unstemmed Sample pooling: burden or solution?
title_short Sample pooling: burden or solution?
title_sort sample pooling: burden or solution?
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477502/
https://www.ncbi.nlm.nih.gov/pubmed/33878507
http://dx.doi.org/10.1016/j.cmi.2021.04.007
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