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Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selec...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9478186/ https://www.ncbi.nlm.nih.gov/pubmed/36119597 http://dx.doi.org/10.3389/fpls.2022.975852 |
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author | Jabeen, Raheela Iqbal, Atia Deeba, Farah Zulfiqar, Faisal Mustafa, Ghulam Nawaz, Haq Habiba, Ume Nafees, Muhammad Zaid, Abbu Siddique, Kadambot H. M. |
author_facet | Jabeen, Raheela Iqbal, Atia Deeba, Farah Zulfiqar, Faisal Mustafa, Ghulam Nawaz, Haq Habiba, Ume Nafees, Muhammad Zaid, Abbu Siddique, Kadambot H. M. |
author_sort | Jabeen, Raheela |
collection | PubMed |
description | Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selected medicinally important plants to explore their signaling mechanisms and defense associated roles for breeding. The DNA of Albizia lebbeck and Moringa oleifera was subjected to PCR amplification using gene-specific primers of defensin genes. Two novel defensin genes were isolated in each species, with sequence lengths of 300 bp in A. lebbeck and 150 bp in M. oleifera. In-silico analysis undertaken to retrieve and align their orthologous sequences revealed 100% similarity of the A. lebbeck gene with the Musa acuminate peroxidase P7-like gene and 85% similarity of the M. oleifera gene with the Manihot esculenta GDP dissociation inhibitor gene. The reliability, stability and physiochemical properties of homology models of these sequences was confirmed through online computational studies. This preliminary study confirmed the presence of novel genes with peroxidase P7 and Rab GDP dissociation inhibitor gene-like activity in A. lebbeck and M. oleifera, respectively, and their potential defense role in plants. Thus, the defensin genes of both species could be used in the synthesis of transgenic self-defensive plants with increased disease resistance and as potential candidates for improved crop production and thraputic formulation in the future. |
format | Online Article Text |
id | pubmed-9478186 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94781862022-09-17 Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling Jabeen, Raheela Iqbal, Atia Deeba, Farah Zulfiqar, Faisal Mustafa, Ghulam Nawaz, Haq Habiba, Ume Nafees, Muhammad Zaid, Abbu Siddique, Kadambot H. M. Front Plant Sci Plant Science Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selected medicinally important plants to explore their signaling mechanisms and defense associated roles for breeding. The DNA of Albizia lebbeck and Moringa oleifera was subjected to PCR amplification using gene-specific primers of defensin genes. Two novel defensin genes were isolated in each species, with sequence lengths of 300 bp in A. lebbeck and 150 bp in M. oleifera. In-silico analysis undertaken to retrieve and align their orthologous sequences revealed 100% similarity of the A. lebbeck gene with the Musa acuminate peroxidase P7-like gene and 85% similarity of the M. oleifera gene with the Manihot esculenta GDP dissociation inhibitor gene. The reliability, stability and physiochemical properties of homology models of these sequences was confirmed through online computational studies. This preliminary study confirmed the presence of novel genes with peroxidase P7 and Rab GDP dissociation inhibitor gene-like activity in A. lebbeck and M. oleifera, respectively, and their potential defense role in plants. Thus, the defensin genes of both species could be used in the synthesis of transgenic self-defensive plants with increased disease resistance and as potential candidates for improved crop production and thraputic formulation in the future. Frontiers Media S.A. 2022-09-02 /pmc/articles/PMC9478186/ /pubmed/36119597 http://dx.doi.org/10.3389/fpls.2022.975852 Text en Copyright © 2022 Jabeen, Iqbal, Deeba, Zulfiqar, Mustafa, Nawaz, Habiba, Nafees, Zaid and Siddique. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Jabeen, Raheela Iqbal, Atia Deeba, Farah Zulfiqar, Faisal Mustafa, Ghulam Nawaz, Haq Habiba, Ume Nafees, Muhammad Zaid, Abbu Siddique, Kadambot H. M. Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title | Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title_full | Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title_fullStr | Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title_full_unstemmed | Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title_short | Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling |
title_sort | isolation and characterization of peroxidase p7-like gene and rab-gdi like gene from potential medicinal plants: a step toward understanding cell defense signaling |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9478186/ https://www.ncbi.nlm.nih.gov/pubmed/36119597 http://dx.doi.org/10.3389/fpls.2022.975852 |
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