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Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling

Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selec...

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Autores principales: Jabeen, Raheela, Iqbal, Atia, Deeba, Farah, Zulfiqar, Faisal, Mustafa, Ghulam, Nawaz, Haq, Habiba, Ume, Nafees, Muhammad, Zaid, Abbu, Siddique, Kadambot H. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9478186/
https://www.ncbi.nlm.nih.gov/pubmed/36119597
http://dx.doi.org/10.3389/fpls.2022.975852
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author Jabeen, Raheela
Iqbal, Atia
Deeba, Farah
Zulfiqar, Faisal
Mustafa, Ghulam
Nawaz, Haq
Habiba, Ume
Nafees, Muhammad
Zaid, Abbu
Siddique, Kadambot H. M.
author_facet Jabeen, Raheela
Iqbal, Atia
Deeba, Farah
Zulfiqar, Faisal
Mustafa, Ghulam
Nawaz, Haq
Habiba, Ume
Nafees, Muhammad
Zaid, Abbu
Siddique, Kadambot H. M.
author_sort Jabeen, Raheela
collection PubMed
description Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selected medicinally important plants to explore their signaling mechanisms and defense associated roles for breeding. The DNA of Albizia lebbeck and Moringa oleifera was subjected to PCR amplification using gene-specific primers of defensin genes. Two novel defensin genes were isolated in each species, with sequence lengths of 300 bp in A. lebbeck and 150 bp in M. oleifera. In-silico analysis undertaken to retrieve and align their orthologous sequences revealed 100% similarity of the A. lebbeck gene with the Musa acuminate peroxidase P7-like gene and 85% similarity of the M. oleifera gene with the Manihot esculenta GDP dissociation inhibitor gene. The reliability, stability and physiochemical properties of homology models of these sequences was confirmed through online computational studies. This preliminary study confirmed the presence of novel genes with peroxidase P7 and Rab GDP dissociation inhibitor gene-like activity in A. lebbeck and M. oleifera, respectively, and their potential defense role in plants. Thus, the defensin genes of both species could be used in the synthesis of transgenic self-defensive plants with increased disease resistance and as potential candidates for improved crop production and thraputic formulation in the future.
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spelling pubmed-94781862022-09-17 Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling Jabeen, Raheela Iqbal, Atia Deeba, Farah Zulfiqar, Faisal Mustafa, Ghulam Nawaz, Haq Habiba, Ume Nafees, Muhammad Zaid, Abbu Siddique, Kadambot H. M. Front Plant Sci Plant Science Defensin genes form part of a plant’s defense system and are activated when exposed to biotic or abiotic stress. They play a vital role in controlling many signaling pathways involved in various plant defense mechanisms. This research aimed to isolate and characterize novel defensin genes from selected medicinally important plants to explore their signaling mechanisms and defense associated roles for breeding. The DNA of Albizia lebbeck and Moringa oleifera was subjected to PCR amplification using gene-specific primers of defensin genes. Two novel defensin genes were isolated in each species, with sequence lengths of 300 bp in A. lebbeck and 150 bp in M. oleifera. In-silico analysis undertaken to retrieve and align their orthologous sequences revealed 100% similarity of the A. lebbeck gene with the Musa acuminate peroxidase P7-like gene and 85% similarity of the M. oleifera gene with the Manihot esculenta GDP dissociation inhibitor gene. The reliability, stability and physiochemical properties of homology models of these sequences was confirmed through online computational studies. This preliminary study confirmed the presence of novel genes with peroxidase P7 and Rab GDP dissociation inhibitor gene-like activity in A. lebbeck and M. oleifera, respectively, and their potential defense role in plants. Thus, the defensin genes of both species could be used in the synthesis of transgenic self-defensive plants with increased disease resistance and as potential candidates for improved crop production and thraputic formulation in the future. Frontiers Media S.A. 2022-09-02 /pmc/articles/PMC9478186/ /pubmed/36119597 http://dx.doi.org/10.3389/fpls.2022.975852 Text en Copyright © 2022 Jabeen, Iqbal, Deeba, Zulfiqar, Mustafa, Nawaz, Habiba, Nafees, Zaid and Siddique. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Jabeen, Raheela
Iqbal, Atia
Deeba, Farah
Zulfiqar, Faisal
Mustafa, Ghulam
Nawaz, Haq
Habiba, Ume
Nafees, Muhammad
Zaid, Abbu
Siddique, Kadambot H. M.
Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title_full Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title_fullStr Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title_full_unstemmed Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title_short Isolation and characterization of peroxidase P7-like gene and Rab-GDI like gene from potential medicinal plants: A step toward understanding cell defense signaling
title_sort isolation and characterization of peroxidase p7-like gene and rab-gdi like gene from potential medicinal plants: a step toward understanding cell defense signaling
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9478186/
https://www.ncbi.nlm.nih.gov/pubmed/36119597
http://dx.doi.org/10.3389/fpls.2022.975852
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