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Emerging Themes in CryoEM—Single Particle Analysis Image Processing
[Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479088/ https://www.ncbi.nlm.nih.gov/pubmed/35785962 http://dx.doi.org/10.1021/acs.chemrev.1c00850 |
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author | Vilas, Jose Luis Carazo, Jose Maria Sorzano, Carlos Oscar S. |
author_facet | Vilas, Jose Luis Carazo, Jose Maria Sorzano, Carlos Oscar S. |
author_sort | Vilas, Jose Luis |
collection | PubMed |
description | [Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed to the boosting of CryoEM in the past decade. This work reviews the main contributions in image processing to the current reconstruction workflow of single particle analysis (SPA) by CryoEM. Our review emphasizes the time evolution of the algorithms across the different steps of the workflow differentiating between two groups of approaches: analytical methods and deep learning algorithms. We present an analysis of the current state of the art. Finally, we discuss the emerging problems and challenges still to be addressed in the evolution of CryoEM image processing methods in SPA. |
format | Online Article Text |
id | pubmed-9479088 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-94790882022-09-17 Emerging Themes in CryoEM—Single Particle Analysis Image Processing Vilas, Jose Luis Carazo, Jose Maria Sorzano, Carlos Oscar S. Chem Rev [Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed to the boosting of CryoEM in the past decade. This work reviews the main contributions in image processing to the current reconstruction workflow of single particle analysis (SPA) by CryoEM. Our review emphasizes the time evolution of the algorithms across the different steps of the workflow differentiating between two groups of approaches: analytical methods and deep learning algorithms. We present an analysis of the current state of the art. Finally, we discuss the emerging problems and challenges still to be addressed in the evolution of CryoEM image processing methods in SPA. American Chemical Society 2022-07-04 2022-09-14 /pmc/articles/PMC9479088/ /pubmed/35785962 http://dx.doi.org/10.1021/acs.chemrev.1c00850 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Vilas, Jose Luis Carazo, Jose Maria Sorzano, Carlos Oscar S. Emerging Themes in CryoEM—Single Particle Analysis Image Processing |
title | Emerging Themes in CryoEM—Single Particle Analysis
Image Processing |
title_full | Emerging Themes in CryoEM—Single Particle Analysis
Image Processing |
title_fullStr | Emerging Themes in CryoEM—Single Particle Analysis
Image Processing |
title_full_unstemmed | Emerging Themes in CryoEM—Single Particle Analysis
Image Processing |
title_short | Emerging Themes in CryoEM—Single Particle Analysis
Image Processing |
title_sort | emerging themes in cryoem—single particle analysis
image processing |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479088/ https://www.ncbi.nlm.nih.gov/pubmed/35785962 http://dx.doi.org/10.1021/acs.chemrev.1c00850 |
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