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Emerging Themes in CryoEM—Single Particle Analysis Image Processing

[Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed...

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Autores principales: Vilas, Jose Luis, Carazo, Jose Maria, Sorzano, Carlos Oscar S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479088/
https://www.ncbi.nlm.nih.gov/pubmed/35785962
http://dx.doi.org/10.1021/acs.chemrev.1c00850
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author Vilas, Jose Luis
Carazo, Jose Maria
Sorzano, Carlos Oscar S.
author_facet Vilas, Jose Luis
Carazo, Jose Maria
Sorzano, Carlos Oscar S.
author_sort Vilas, Jose Luis
collection PubMed
description [Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed to the boosting of CryoEM in the past decade. This work reviews the main contributions in image processing to the current reconstruction workflow of single particle analysis (SPA) by CryoEM. Our review emphasizes the time evolution of the algorithms across the different steps of the workflow differentiating between two groups of approaches: analytical methods and deep learning algorithms. We present an analysis of the current state of the art. Finally, we discuss the emerging problems and challenges still to be addressed in the evolution of CryoEM image processing methods in SPA.
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spelling pubmed-94790882022-09-17 Emerging Themes in CryoEM—Single Particle Analysis Image Processing Vilas, Jose Luis Carazo, Jose Maria Sorzano, Carlos Oscar S. Chem Rev [Image: see text] Cryo-electron microscopy (CryoEM) has become a vital technique in structural biology. It is an interdisciplinary field that takes advantage of advances in biochemistry, physics, and image processing, among other disciplines. Innovations in these three basic pillars have contributed to the boosting of CryoEM in the past decade. This work reviews the main contributions in image processing to the current reconstruction workflow of single particle analysis (SPA) by CryoEM. Our review emphasizes the time evolution of the algorithms across the different steps of the workflow differentiating between two groups of approaches: analytical methods and deep learning algorithms. We present an analysis of the current state of the art. Finally, we discuss the emerging problems and challenges still to be addressed in the evolution of CryoEM image processing methods in SPA. American Chemical Society 2022-07-04 2022-09-14 /pmc/articles/PMC9479088/ /pubmed/35785962 http://dx.doi.org/10.1021/acs.chemrev.1c00850 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Vilas, Jose Luis
Carazo, Jose Maria
Sorzano, Carlos Oscar S.
Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title_full Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title_fullStr Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title_full_unstemmed Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title_short Emerging Themes in CryoEM—Single Particle Analysis Image Processing
title_sort emerging themes in cryoem—single particle analysis image processing
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479088/
https://www.ncbi.nlm.nih.gov/pubmed/35785962
http://dx.doi.org/10.1021/acs.chemrev.1c00850
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