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Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach
OBJECTIVE: Atrial Fibrillation (A-fib) is an abnormal heartbeat condition in which the heart races and beats in an uncontrollable way. It is observed that the presence of increased epicardial fat/fatty tissue in the atrium can lead to A-fib. Persistent homology using topological features can be used...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479320/ https://www.ncbi.nlm.nih.gov/pubmed/36109768 http://dx.doi.org/10.1186/s13104-022-06173-2 |
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author | Deepa, Deepa Singh, Yashbir Mansoor, Wathiq Hu, Weichih Paul, Rahul Carlsson, Gunnar E. |
author_facet | Deepa, Deepa Singh, Yashbir Mansoor, Wathiq Hu, Weichih Paul, Rahul Carlsson, Gunnar E. |
author_sort | Deepa, Deepa |
collection | PubMed |
description | OBJECTIVE: Atrial Fibrillation (A-fib) is an abnormal heartbeat condition in which the heart races and beats in an uncontrollable way. It is observed that the presence of increased epicardial fat/fatty tissue in the atrium can lead to A-fib. Persistent homology using topological features can be used to recapitulate enormous amounts of spatially complicated medical data into a visual code to identify a specific pattern of epicardial fat tissue with non-fat tissue. Our aim is to evaluate the topological pattern of left atrium epicardial fat tissue with non-fat tissue. RESULTS: A topological data analysis approach was acquired to study the imaging pattern between the left atrium epicardial fat tissue and non-fat tissue patches. The patches of eight patients from CT images of the left atrium heart were used and categorized into “left atrium epicardial fat tissue” and “non-fat tissue” groups. The features that distinguish the “epicardial fat tissue” and “non-fat tissue” groups are extracted using persistent homology (PH). Our result reveals that our proposed research can discriminate between left atrium epicardial fat tissue and non-fat tissue. Specifically, the range of Betti numbers in the epicardial tissue is smaller (0–30) than the non-fat tissue (0–100), indicating that non-fat tissue has good topology. |
format | Online Article Text |
id | pubmed-9479320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-94793202022-09-17 Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach Deepa, Deepa Singh, Yashbir Mansoor, Wathiq Hu, Weichih Paul, Rahul Carlsson, Gunnar E. BMC Res Notes Research Note OBJECTIVE: Atrial Fibrillation (A-fib) is an abnormal heartbeat condition in which the heart races and beats in an uncontrollable way. It is observed that the presence of increased epicardial fat/fatty tissue in the atrium can lead to A-fib. Persistent homology using topological features can be used to recapitulate enormous amounts of spatially complicated medical data into a visual code to identify a specific pattern of epicardial fat tissue with non-fat tissue. Our aim is to evaluate the topological pattern of left atrium epicardial fat tissue with non-fat tissue. RESULTS: A topological data analysis approach was acquired to study the imaging pattern between the left atrium epicardial fat tissue and non-fat tissue patches. The patches of eight patients from CT images of the left atrium heart were used and categorized into “left atrium epicardial fat tissue” and “non-fat tissue” groups. The features that distinguish the “epicardial fat tissue” and “non-fat tissue” groups are extracted using persistent homology (PH). Our result reveals that our proposed research can discriminate between left atrium epicardial fat tissue and non-fat tissue. Specifically, the range of Betti numbers in the epicardial tissue is smaller (0–30) than the non-fat tissue (0–100), indicating that non-fat tissue has good topology. BioMed Central 2022-09-15 /pmc/articles/PMC9479320/ /pubmed/36109768 http://dx.doi.org/10.1186/s13104-022-06173-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Note Deepa, Deepa Singh, Yashbir Mansoor, Wathiq Hu, Weichih Paul, Rahul Carlsson, Gunnar E. Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title | Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title_full | Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title_fullStr | Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title_full_unstemmed | Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title_short | Comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
title_sort | comparative study of left atrium epicardial fat tissue pattern using persistent homology approach |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9479320/ https://www.ncbi.nlm.nih.gov/pubmed/36109768 http://dx.doi.org/10.1186/s13104-022-06173-2 |
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