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A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481166/ https://www.ncbi.nlm.nih.gov/pubmed/36067248 http://dx.doi.org/10.1371/journal.pbio.3001772 |
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author | Wu, Sheng-Yi Wen, Yurong Serre, Nelson B. C. Laursen, Cathrine Charlotte Heiede Dietz, Andrea Grostøl Taylor, Brian R. Drobizhev, Mikhail Molina, Rosana S. Aggarwal, Abhi Rancic, Vladimir Becker, Michael Ballanyi, Klaus Podgorski, Kaspar Hirase, Hajime Nedergaard, Maiken Fendrych, Matyáš Lemieux, M. Joanne Eberl, Daniel F. Kay, Alan R. Campbell, Robert E. Shen, Yi |
author_facet | Wu, Sheng-Yi Wen, Yurong Serre, Nelson B. C. Laursen, Cathrine Charlotte Heiede Dietz, Andrea Grostøl Taylor, Brian R. Drobizhev, Mikhail Molina, Rosana S. Aggarwal, Abhi Rancic, Vladimir Becker, Michael Ballanyi, Klaus Podgorski, Kaspar Hirase, Hajime Nedergaard, Maiken Fendrych, Matyáš Lemieux, M. Joanne Eberl, Daniel F. Kay, Alan R. Campbell, Robert E. Shen, Yi |
author_sort | Wu, Sheng-Yi |
collection | PubMed |
description | Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal structure of a previously reported genetically-encoded fluorescent K(+) biosensor, GINKO1, in the K(+)-bound state. Using structure-guided optimization and directed evolution, we have engineered an improved K(+) biosensor, designated GINKO2, with higher sensitivity and specificity. We have demonstrated the utility of GINKO2 for in vivo detection and imaging of K(+) dynamics in multiple model organisms, including bacteria, plants, and mice. |
format | Online Article Text |
id | pubmed-9481166 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-94811662022-09-17 A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life Wu, Sheng-Yi Wen, Yurong Serre, Nelson B. C. Laursen, Cathrine Charlotte Heiede Dietz, Andrea Grostøl Taylor, Brian R. Drobizhev, Mikhail Molina, Rosana S. Aggarwal, Abhi Rancic, Vladimir Becker, Michael Ballanyi, Klaus Podgorski, Kaspar Hirase, Hajime Nedergaard, Maiken Fendrych, Matyáš Lemieux, M. Joanne Eberl, Daniel F. Kay, Alan R. Campbell, Robert E. Shen, Yi PLoS Biol Methods and Resources Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal structure of a previously reported genetically-encoded fluorescent K(+) biosensor, GINKO1, in the K(+)-bound state. Using structure-guided optimization and directed evolution, we have engineered an improved K(+) biosensor, designated GINKO2, with higher sensitivity and specificity. We have demonstrated the utility of GINKO2 for in vivo detection and imaging of K(+) dynamics in multiple model organisms, including bacteria, plants, and mice. Public Library of Science 2022-09-06 /pmc/articles/PMC9481166/ /pubmed/36067248 http://dx.doi.org/10.1371/journal.pbio.3001772 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Methods and Resources Wu, Sheng-Yi Wen, Yurong Serre, Nelson B. C. Laursen, Cathrine Charlotte Heiede Dietz, Andrea Grostøl Taylor, Brian R. Drobizhev, Mikhail Molina, Rosana S. Aggarwal, Abhi Rancic, Vladimir Becker, Michael Ballanyi, Klaus Podgorski, Kaspar Hirase, Hajime Nedergaard, Maiken Fendrych, Matyáš Lemieux, M. Joanne Eberl, Daniel F. Kay, Alan R. Campbell, Robert E. Shen, Yi A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title | A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title_full | A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title_fullStr | A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title_full_unstemmed | A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title_short | A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
title_sort | sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life |
topic | Methods and Resources |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481166/ https://www.ncbi.nlm.nih.gov/pubmed/36067248 http://dx.doi.org/10.1371/journal.pbio.3001772 |
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