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A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life

Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal...

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Autores principales: Wu, Sheng-Yi, Wen, Yurong, Serre, Nelson B. C., Laursen, Cathrine Charlotte Heiede, Dietz, Andrea Grostøl, Taylor, Brian R., Drobizhev, Mikhail, Molina, Rosana S., Aggarwal, Abhi, Rancic, Vladimir, Becker, Michael, Ballanyi, Klaus, Podgorski, Kaspar, Hirase, Hajime, Nedergaard, Maiken, Fendrych, Matyáš, Lemieux, M. Joanne, Eberl, Daniel F., Kay, Alan R., Campbell, Robert E., Shen, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481166/
https://www.ncbi.nlm.nih.gov/pubmed/36067248
http://dx.doi.org/10.1371/journal.pbio.3001772
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author Wu, Sheng-Yi
Wen, Yurong
Serre, Nelson B. C.
Laursen, Cathrine Charlotte Heiede
Dietz, Andrea Grostøl
Taylor, Brian R.
Drobizhev, Mikhail
Molina, Rosana S.
Aggarwal, Abhi
Rancic, Vladimir
Becker, Michael
Ballanyi, Klaus
Podgorski, Kaspar
Hirase, Hajime
Nedergaard, Maiken
Fendrych, Matyáš
Lemieux, M. Joanne
Eberl, Daniel F.
Kay, Alan R.
Campbell, Robert E.
Shen, Yi
author_facet Wu, Sheng-Yi
Wen, Yurong
Serre, Nelson B. C.
Laursen, Cathrine Charlotte Heiede
Dietz, Andrea Grostøl
Taylor, Brian R.
Drobizhev, Mikhail
Molina, Rosana S.
Aggarwal, Abhi
Rancic, Vladimir
Becker, Michael
Ballanyi, Klaus
Podgorski, Kaspar
Hirase, Hajime
Nedergaard, Maiken
Fendrych, Matyáš
Lemieux, M. Joanne
Eberl, Daniel F.
Kay, Alan R.
Campbell, Robert E.
Shen, Yi
author_sort Wu, Sheng-Yi
collection PubMed
description Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal structure of a previously reported genetically-encoded fluorescent K(+) biosensor, GINKO1, in the K(+)-bound state. Using structure-guided optimization and directed evolution, we have engineered an improved K(+) biosensor, designated GINKO2, with higher sensitivity and specificity. We have demonstrated the utility of GINKO2 for in vivo detection and imaging of K(+) dynamics in multiple model organisms, including bacteria, plants, and mice.
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spelling pubmed-94811662022-09-17 A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life Wu, Sheng-Yi Wen, Yurong Serre, Nelson B. C. Laursen, Cathrine Charlotte Heiede Dietz, Andrea Grostøl Taylor, Brian R. Drobizhev, Mikhail Molina, Rosana S. Aggarwal, Abhi Rancic, Vladimir Becker, Michael Ballanyi, Klaus Podgorski, Kaspar Hirase, Hajime Nedergaard, Maiken Fendrych, Matyáš Lemieux, M. Joanne Eberl, Daniel F. Kay, Alan R. Campbell, Robert E. Shen, Yi PLoS Biol Methods and Resources Potassium ion (K(+)) plays a critical role as an essential electrolyte in all biological systems. Genetically-encoded fluorescent K(+) biosensors are promising tools to further improve our understanding of K(+)-dependent processes under normal and pathological conditions. Here, we report the crystal structure of a previously reported genetically-encoded fluorescent K(+) biosensor, GINKO1, in the K(+)-bound state. Using structure-guided optimization and directed evolution, we have engineered an improved K(+) biosensor, designated GINKO2, with higher sensitivity and specificity. We have demonstrated the utility of GINKO2 for in vivo detection and imaging of K(+) dynamics in multiple model organisms, including bacteria, plants, and mice. Public Library of Science 2022-09-06 /pmc/articles/PMC9481166/ /pubmed/36067248 http://dx.doi.org/10.1371/journal.pbio.3001772 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Methods and Resources
Wu, Sheng-Yi
Wen, Yurong
Serre, Nelson B. C.
Laursen, Cathrine Charlotte Heiede
Dietz, Andrea Grostøl
Taylor, Brian R.
Drobizhev, Mikhail
Molina, Rosana S.
Aggarwal, Abhi
Rancic, Vladimir
Becker, Michael
Ballanyi, Klaus
Podgorski, Kaspar
Hirase, Hajime
Nedergaard, Maiken
Fendrych, Matyáš
Lemieux, M. Joanne
Eberl, Daniel F.
Kay, Alan R.
Campbell, Robert E.
Shen, Yi
A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title_full A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title_fullStr A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title_full_unstemmed A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title_short A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
title_sort sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life
topic Methods and Resources
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481166/
https://www.ncbi.nlm.nih.gov/pubmed/36067248
http://dx.doi.org/10.1371/journal.pbio.3001772
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