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Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy
BACKGROUND: Tryptophan 2,3-dioxygenase (TDO) encoded by TDO2, a rate-limiting enzyme in the kynurenine pathway, catabolizes tryptophan to kynurenine, evades immune surveillance, and promotes tumor growth. Although accumulating evidence suggests a crucial role of TDO2 during tumor formation and devel...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481368/ https://www.ncbi.nlm.nih.gov/pubmed/36118672 http://dx.doi.org/10.1155/2022/5447017 |
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author | Cui, Jing Tian, Yongjie Liu, Tianhang Lin, Xueyan Li, Lanyu Li, Zhonghui Shen, Liang |
author_facet | Cui, Jing Tian, Yongjie Liu, Tianhang Lin, Xueyan Li, Lanyu Li, Zhonghui Shen, Liang |
author_sort | Cui, Jing |
collection | PubMed |
description | BACKGROUND: Tryptophan 2,3-dioxygenase (TDO) encoded by TDO2, a rate-limiting enzyme in the kynurenine pathway, catabolizes tryptophan to kynurenine, evades immune surveillance, and promotes tumor growth. Although accumulating evidence suggests a crucial role of TDO2 during tumor formation and development, systematic evaluation of TDO2 across human cancers has rarely been reported. METHODS: To shed more light on the role of TDO2 in human cancer, we explored the expression profiles of TDO2 and identified its prognostic value in pancancer analysis through TCGA, CCLE, and GTEx databases. We further utilized TCGA data to evaluate the association between TDO2 and tumor immunological features, such as mismatch repair (MMR), tumor immune infiltration, immune checkpoint-related genes, tumor mutational burden (TMB), microsatellite instability (MSI), and DNA methyltransferase (DNMT). RESULTS: TDO2 exhibited different expression levels in various cancer cell lines. Frequently, TDO2 was detected to be highly expressed in the majority of cancers. In addition, high TDO2 expression was correlated with an unfavorable prognosis for patients in KIRP, LGG, TGCT, and UVM. Moreover, high TDO2 expression level positively correlated with higher immune infiltration, especially dendritic cells. Additionally, there is a close relationship between TDO2 and immune checkpoint-related gene markers, such as LAIR1, CD276, NRP1, CD80, and CD86. Finally, correlation analysis has demonstrated a high-correlation between TDO2 and TMB, MSI, MMR, and DNMT of multiple cancer types. CONCLUSION: Therefore, our results suggest that TDO2 can function as a potential prognostic biomarker due to its role in tumor immunity regulation. |
format | Online Article Text |
id | pubmed-9481368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-94813682022-09-17 Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy Cui, Jing Tian, Yongjie Liu, Tianhang Lin, Xueyan Li, Lanyu Li, Zhonghui Shen, Liang Dis Markers Research Article BACKGROUND: Tryptophan 2,3-dioxygenase (TDO) encoded by TDO2, a rate-limiting enzyme in the kynurenine pathway, catabolizes tryptophan to kynurenine, evades immune surveillance, and promotes tumor growth. Although accumulating evidence suggests a crucial role of TDO2 during tumor formation and development, systematic evaluation of TDO2 across human cancers has rarely been reported. METHODS: To shed more light on the role of TDO2 in human cancer, we explored the expression profiles of TDO2 and identified its prognostic value in pancancer analysis through TCGA, CCLE, and GTEx databases. We further utilized TCGA data to evaluate the association between TDO2 and tumor immunological features, such as mismatch repair (MMR), tumor immune infiltration, immune checkpoint-related genes, tumor mutational burden (TMB), microsatellite instability (MSI), and DNA methyltransferase (DNMT). RESULTS: TDO2 exhibited different expression levels in various cancer cell lines. Frequently, TDO2 was detected to be highly expressed in the majority of cancers. In addition, high TDO2 expression was correlated with an unfavorable prognosis for patients in KIRP, LGG, TGCT, and UVM. Moreover, high TDO2 expression level positively correlated with higher immune infiltration, especially dendritic cells. Additionally, there is a close relationship between TDO2 and immune checkpoint-related gene markers, such as LAIR1, CD276, NRP1, CD80, and CD86. Finally, correlation analysis has demonstrated a high-correlation between TDO2 and TMB, MSI, MMR, and DNMT of multiple cancer types. CONCLUSION: Therefore, our results suggest that TDO2 can function as a potential prognostic biomarker due to its role in tumor immunity regulation. Hindawi 2022-09-09 /pmc/articles/PMC9481368/ /pubmed/36118672 http://dx.doi.org/10.1155/2022/5447017 Text en Copyright © 2022 Jing Cui et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Cui, Jing Tian, Yongjie Liu, Tianhang Lin, Xueyan Li, Lanyu Li, Zhonghui Shen, Liang Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title | Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title_full | Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title_fullStr | Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title_full_unstemmed | Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title_short | Pancancer Analysis of Revealed TDO2 as a Biomarker of Prognosis and Immunotherapy |
title_sort | pancancer analysis of revealed tdo2 as a biomarker of prognosis and immunotherapy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9481368/ https://www.ncbi.nlm.nih.gov/pubmed/36118672 http://dx.doi.org/10.1155/2022/5447017 |
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