Cargando…

Prognostic signature related to the immune environment of oral squamous cell carcinoma

Oral squamous cell carcinoma (OSCC) prognosis remains poor. Here we aimed to identify an effective prognostic signature for predicting the survival of patients with OSCC. Gene-expression and clinical data were obtained from the Cancer Genome Atlas database. Immune microenvironment-associated genes w...

Descripción completa

Detalles Bibliográficos
Autores principales: Hua, Yingjie, Sun, Xuehui, Luan, Kefeng, Wang, Changlei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9482419/
https://www.ncbi.nlm.nih.gov/pubmed/36185403
http://dx.doi.org/10.1515/biol-2022-0467
_version_ 1784791450886602752
author Hua, Yingjie
Sun, Xuehui
Luan, Kefeng
Wang, Changlei
author_facet Hua, Yingjie
Sun, Xuehui
Luan, Kefeng
Wang, Changlei
author_sort Hua, Yingjie
collection PubMed
description Oral squamous cell carcinoma (OSCC) prognosis remains poor. Here we aimed to identify an effective prognostic signature for predicting the survival of patients with OSCC. Gene-expression and clinical data were obtained from the Cancer Genome Atlas database. Immune microenvironment-associated genes were identified using bioinformatics. Subtype and risk-score analyses were performed for these genes. Kaplan–Meier analysis and immune cell infiltration level were explored in different subtypes and risk-score groups. The prognostic ability, independent prognosis, and clinical features of the risk score were assessed. Furthermore, immunotherapy response based on the risk score was explored. Finally, a conjoint analysis of the subtype and risk-score groups was performed to determine the best prognostic combination. We found 11 potential prognostic genes and constructed a risk-score model. The subtype cluster 2 and a high-risk group showed the worst overall survival; differences in survival status might be due to the different immune cell infiltration levels. The risk score showed good performance, independent prognostic value, and valuable clinical application. Higher risk scores showed higher Tumor Immune Dysfunction and Exclusion scores, indicating that patients with a high-risk score were less likely to benefit from immunotherapy. Finally, conjoint analysis for the subgroups and risk groups showed the best predictive ability.
format Online
Article
Text
id pubmed-9482419
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher De Gruyter
record_format MEDLINE/PubMed
spelling pubmed-94824192022-10-01 Prognostic signature related to the immune environment of oral squamous cell carcinoma Hua, Yingjie Sun, Xuehui Luan, Kefeng Wang, Changlei Open Life Sci Research Article Oral squamous cell carcinoma (OSCC) prognosis remains poor. Here we aimed to identify an effective prognostic signature for predicting the survival of patients with OSCC. Gene-expression and clinical data were obtained from the Cancer Genome Atlas database. Immune microenvironment-associated genes were identified using bioinformatics. Subtype and risk-score analyses were performed for these genes. Kaplan–Meier analysis and immune cell infiltration level were explored in different subtypes and risk-score groups. The prognostic ability, independent prognosis, and clinical features of the risk score were assessed. Furthermore, immunotherapy response based on the risk score was explored. Finally, a conjoint analysis of the subtype and risk-score groups was performed to determine the best prognostic combination. We found 11 potential prognostic genes and constructed a risk-score model. The subtype cluster 2 and a high-risk group showed the worst overall survival; differences in survival status might be due to the different immune cell infiltration levels. The risk score showed good performance, independent prognostic value, and valuable clinical application. Higher risk scores showed higher Tumor Immune Dysfunction and Exclusion scores, indicating that patients with a high-risk score were less likely to benefit from immunotherapy. Finally, conjoint analysis for the subgroups and risk groups showed the best predictive ability. De Gruyter 2022-09-14 /pmc/articles/PMC9482419/ /pubmed/36185403 http://dx.doi.org/10.1515/biol-2022-0467 Text en © 2022 Yingjie Hua et al., published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Hua, Yingjie
Sun, Xuehui
Luan, Kefeng
Wang, Changlei
Prognostic signature related to the immune environment of oral squamous cell carcinoma
title Prognostic signature related to the immune environment of oral squamous cell carcinoma
title_full Prognostic signature related to the immune environment of oral squamous cell carcinoma
title_fullStr Prognostic signature related to the immune environment of oral squamous cell carcinoma
title_full_unstemmed Prognostic signature related to the immune environment of oral squamous cell carcinoma
title_short Prognostic signature related to the immune environment of oral squamous cell carcinoma
title_sort prognostic signature related to the immune environment of oral squamous cell carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9482419/
https://www.ncbi.nlm.nih.gov/pubmed/36185403
http://dx.doi.org/10.1515/biol-2022-0467
work_keys_str_mv AT huayingjie prognosticsignaturerelatedtotheimmuneenvironmentoforalsquamouscellcarcinoma
AT sunxuehui prognosticsignaturerelatedtotheimmuneenvironmentoforalsquamouscellcarcinoma
AT luankefeng prognosticsignaturerelatedtotheimmuneenvironmentoforalsquamouscellcarcinoma
AT wangchanglei prognosticsignaturerelatedtotheimmuneenvironmentoforalsquamouscellcarcinoma