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Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study
BACKGROUND: Timely identification of deteriorating COVID-19 patients is needed to guide changes in clinical management and admission to intensive care units (ICUs). There is significant concern that widely used Early warning scores (EWSs) underestimate illness severity in COVID-19 patients and there...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9482891/ https://www.ncbi.nlm.nih.gov/pubmed/36117237 http://dx.doi.org/10.1186/s40635-022-00465-4 |
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author | Smit, Jim M. Krijthe, Jesse H. Tintu, Andrei N. Endeman, Henrik Ludikhuize, Jeroen van Genderen, Michel E. Hassan, Shermarke El Moussaoui, Rachida Westerweel, Peter E. Goekoop, Robbert J. Waverijn, Geeke Verheijen, Tim den Hollander, Jan G. de Boer, Mark G. J. Gommers, Diederik A. M. P. J. van der Vlies, Robin Schellings, Mark Carels, Regina A. van Nieuwkoop, Cees Arbous, Sesmu M. van Bommel, Jasper Knevel, Rachel de Rijke, Yolanda B. Reinders, Marcel J. T. |
author_facet | Smit, Jim M. Krijthe, Jesse H. Tintu, Andrei N. Endeman, Henrik Ludikhuize, Jeroen van Genderen, Michel E. Hassan, Shermarke El Moussaoui, Rachida Westerweel, Peter E. Goekoop, Robbert J. Waverijn, Geeke Verheijen, Tim den Hollander, Jan G. de Boer, Mark G. J. Gommers, Diederik A. M. P. J. van der Vlies, Robin Schellings, Mark Carels, Regina A. van Nieuwkoop, Cees Arbous, Sesmu M. van Bommel, Jasper Knevel, Rachel de Rijke, Yolanda B. Reinders, Marcel J. T. |
author_sort | Smit, Jim M. |
collection | PubMed |
description | BACKGROUND: Timely identification of deteriorating COVID-19 patients is needed to guide changes in clinical management and admission to intensive care units (ICUs). There is significant concern that widely used Early warning scores (EWSs) underestimate illness severity in COVID-19 patients and therefore, we developed an early warning model specifically for COVID-19 patients. METHODS: We retrospectively collected electronic medical record data to extract predictors and used these to fit a random forest model. To simulate the situation in which the model would have been developed after the first and implemented during the second COVID-19 ‘wave’ in the Netherlands, we performed a temporal validation by splitting all included patients into groups admitted before and after August 1, 2020. Furthermore, we propose a method for dynamic model updating to retain model performance over time. We evaluated model discrimination and calibration, performed a decision curve analysis, and quantified the importance of predictors using SHapley Additive exPlanations values. RESULTS: We included 3514 COVID-19 patient admissions from six Dutch hospitals between February 2020 and May 2021, and included a total of 18 predictors for model fitting. The model showed a higher discriminative performance in terms of partial area under the receiver operating characteristic curve (0.82 [0.80–0.84]) compared to the National early warning score (0.72 [0.69–0.74]) and the Modified early warning score (0.67 [0.65–0.69]), a greater net benefit over a range of clinically relevant model thresholds, and relatively good calibration (intercept = 0.03 [− 0.09 to 0.14], slope = 0.79 [0.73–0.86]). CONCLUSIONS: This study shows the potential benefit of moving from early warning models for the general inpatient population to models for specific patient groups. Further (independent) validation of the model is needed. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40635-022-00465-4. |
format | Online Article Text |
id | pubmed-9482891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-94828912022-09-19 Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study Smit, Jim M. Krijthe, Jesse H. Tintu, Andrei N. Endeman, Henrik Ludikhuize, Jeroen van Genderen, Michel E. Hassan, Shermarke El Moussaoui, Rachida Westerweel, Peter E. Goekoop, Robbert J. Waverijn, Geeke Verheijen, Tim den Hollander, Jan G. de Boer, Mark G. J. Gommers, Diederik A. M. P. J. van der Vlies, Robin Schellings, Mark Carels, Regina A. van Nieuwkoop, Cees Arbous, Sesmu M. van Bommel, Jasper Knevel, Rachel de Rijke, Yolanda B. Reinders, Marcel J. T. Intensive Care Med Exp Research Articles BACKGROUND: Timely identification of deteriorating COVID-19 patients is needed to guide changes in clinical management and admission to intensive care units (ICUs). There is significant concern that widely used Early warning scores (EWSs) underestimate illness severity in COVID-19 patients and therefore, we developed an early warning model specifically for COVID-19 patients. METHODS: We retrospectively collected electronic medical record data to extract predictors and used these to fit a random forest model. To simulate the situation in which the model would have been developed after the first and implemented during the second COVID-19 ‘wave’ in the Netherlands, we performed a temporal validation by splitting all included patients into groups admitted before and after August 1, 2020. Furthermore, we propose a method for dynamic model updating to retain model performance over time. We evaluated model discrimination and calibration, performed a decision curve analysis, and quantified the importance of predictors using SHapley Additive exPlanations values. RESULTS: We included 3514 COVID-19 patient admissions from six Dutch hospitals between February 2020 and May 2021, and included a total of 18 predictors for model fitting. The model showed a higher discriminative performance in terms of partial area under the receiver operating characteristic curve (0.82 [0.80–0.84]) compared to the National early warning score (0.72 [0.69–0.74]) and the Modified early warning score (0.67 [0.65–0.69]), a greater net benefit over a range of clinically relevant model thresholds, and relatively good calibration (intercept = 0.03 [− 0.09 to 0.14], slope = 0.79 [0.73–0.86]). CONCLUSIONS: This study shows the potential benefit of moving from early warning models for the general inpatient population to models for specific patient groups. Further (independent) validation of the model is needed. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40635-022-00465-4. Springer International Publishing 2022-09-19 /pmc/articles/PMC9482891/ /pubmed/36117237 http://dx.doi.org/10.1186/s40635-022-00465-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Articles Smit, Jim M. Krijthe, Jesse H. Tintu, Andrei N. Endeman, Henrik Ludikhuize, Jeroen van Genderen, Michel E. Hassan, Shermarke El Moussaoui, Rachida Westerweel, Peter E. Goekoop, Robbert J. Waverijn, Geeke Verheijen, Tim den Hollander, Jan G. de Boer, Mark G. J. Gommers, Diederik A. M. P. J. van der Vlies, Robin Schellings, Mark Carels, Regina A. van Nieuwkoop, Cees Arbous, Sesmu M. van Bommel, Jasper Knevel, Rachel de Rijke, Yolanda B. Reinders, Marcel J. T. Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title | Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title_full | Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title_fullStr | Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title_full_unstemmed | Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title_short | Development and validation of an early warning model for hospitalized COVID-19 patients: a multi-center retrospective cohort study |
title_sort | development and validation of an early warning model for hospitalized covid-19 patients: a multi-center retrospective cohort study |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9482891/ https://www.ncbi.nlm.nih.gov/pubmed/36117237 http://dx.doi.org/10.1186/s40635-022-00465-4 |
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