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Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia
Aim: Intermittent hypoxia (IH) is the prominent feature of obstructive sleep apnea (OSA) pathophysiology, which is an in dependent risk factor of cardiovascular complications. The effects of IH on adipocyte metabolism were explored by high-throughput sequencing technology. Methods: Plasma was collec...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9485438/ https://www.ncbi.nlm.nih.gov/pubmed/36147493 http://dx.doi.org/10.3389/fgene.2022.963184 |
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author | Duan, Yanru Zhang, Shihan Li, Yu Zhao, Wen Xie, Pinxue Zhang, Xi Du, Yunhui |
author_facet | Duan, Yanru Zhang, Shihan Li, Yu Zhao, Wen Xie, Pinxue Zhang, Xi Du, Yunhui |
author_sort | Duan, Yanru |
collection | PubMed |
description | Aim: Intermittent hypoxia (IH) is the prominent feature of obstructive sleep apnea (OSA) pathophysiology, which is an in dependent risk factor of cardiovascular complications. The effects of IH on adipocyte metabolism were explored by high-throughput sequencing technology. Methods: Plasma was collected from OSA patients and control group to perform mRNA sequencing. 3T3-L1 cells were differentiated into adipocytes then subjected to a 5%–21% O(2) hypoxic environment (IH) for 24 h. High-throughput sequencing method was used to determine differential mRNA and miRNA patterns in fat cells exposed to IH. We then performed Gene Ontology (GO) analysis, identified relevant KEGG pathways and miRNA-target-pathways. Results: Sequencing data showed that OSA affected the expression of 343 mRNAs in the plasma. At the same time, we found that IH affected the expression of 3034 mRNAs in the adipocytes. In addition, 68 differentially expressed mRNAs were overlapped in plasma from OSA patient and IH-induced adipocyte model. We observe that 68 differential genes could be connected to 49 reciprocally expressed miRNAs. We showed that IH significantly reduced the expression of miR-182-5p and miR-30c-2-3p. KEGG predicted that the function of expressed miR-182-5p and miR-30c-2-3p was enriched to AKT signaling pathway. Notably, IH activated PI3K/AKT pathway in fat cells. Conclusion: Our results demonstrated that IH might induce adipocyte metabolism by regulating miR-182-5p and miR-30c-2-3p. |
format | Online Article Text |
id | pubmed-9485438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94854382022-09-21 Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia Duan, Yanru Zhang, Shihan Li, Yu Zhao, Wen Xie, Pinxue Zhang, Xi Du, Yunhui Front Genet Genetics Aim: Intermittent hypoxia (IH) is the prominent feature of obstructive sleep apnea (OSA) pathophysiology, which is an in dependent risk factor of cardiovascular complications. The effects of IH on adipocyte metabolism were explored by high-throughput sequencing technology. Methods: Plasma was collected from OSA patients and control group to perform mRNA sequencing. 3T3-L1 cells were differentiated into adipocytes then subjected to a 5%–21% O(2) hypoxic environment (IH) for 24 h. High-throughput sequencing method was used to determine differential mRNA and miRNA patterns in fat cells exposed to IH. We then performed Gene Ontology (GO) analysis, identified relevant KEGG pathways and miRNA-target-pathways. Results: Sequencing data showed that OSA affected the expression of 343 mRNAs in the plasma. At the same time, we found that IH affected the expression of 3034 mRNAs in the adipocytes. In addition, 68 differentially expressed mRNAs were overlapped in plasma from OSA patient and IH-induced adipocyte model. We observe that 68 differential genes could be connected to 49 reciprocally expressed miRNAs. We showed that IH significantly reduced the expression of miR-182-5p and miR-30c-2-3p. KEGG predicted that the function of expressed miR-182-5p and miR-30c-2-3p was enriched to AKT signaling pathway. Notably, IH activated PI3K/AKT pathway in fat cells. Conclusion: Our results demonstrated that IH might induce adipocyte metabolism by regulating miR-182-5p and miR-30c-2-3p. Frontiers Media S.A. 2022-09-06 /pmc/articles/PMC9485438/ /pubmed/36147493 http://dx.doi.org/10.3389/fgene.2022.963184 Text en Copyright © 2022 Duan, Zhang, Li, Zhao, Xie, Zhang and Du. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Duan, Yanru Zhang, Shihan Li, Yu Zhao, Wen Xie, Pinxue Zhang, Xi Du, Yunhui Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title | Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title_full | Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title_fullStr | Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title_full_unstemmed | Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title_short | Potential regulatory role of miRNA and mRNA link to metabolism affected by chronic intermittent hypoxia |
title_sort | potential regulatory role of mirna and mrna link to metabolism affected by chronic intermittent hypoxia |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9485438/ https://www.ncbi.nlm.nih.gov/pubmed/36147493 http://dx.doi.org/10.3389/fgene.2022.963184 |
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