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Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis

OBJECTIVES: During the COVID-19 pandemic, convolutional neural networks (CNNs) have been used in clinical medicine (eg, X-rays classification). Whether CNNs could inform the epidemiology of COVID-19 classifying street images according to COVID-19 risk is unknown, yet it could pinpoint high-risk plac...

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Autores principales: Carrillo-Larco, Rodrigo M, Castillo-Cara, Manuel, Hernández Santa Cruz, Jose Francisco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9485648/
https://www.ncbi.nlm.nih.gov/pubmed/36123096
http://dx.doi.org/10.1136/bmjopen-2022-063411
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author Carrillo-Larco, Rodrigo M
Castillo-Cara, Manuel
Hernández Santa Cruz, Jose Francisco
author_facet Carrillo-Larco, Rodrigo M
Castillo-Cara, Manuel
Hernández Santa Cruz, Jose Francisco
author_sort Carrillo-Larco, Rodrigo M
collection PubMed
description OBJECTIVES: During the COVID-19 pandemic, convolutional neural networks (CNNs) have been used in clinical medicine (eg, X-rays classification). Whether CNNs could inform the epidemiology of COVID-19 classifying street images according to COVID-19 risk is unknown, yet it could pinpoint high-risk places and relevant features of the built environment. In a feasibility study, we trained CNNs to classify the area surrounding bus stops (Lima, Peru) into moderate or extreme COVID-19 risk. DESIGN: CNN analysis based on images from bus stops and the surrounding area. We used transfer learning and updated the output layer of five CNNs: NASNetLarge, InceptionResNetV2, Xception, ResNet152V2 and ResNet101V2. We chose the best performing CNN, which was further tuned. We used GradCam to understand the classification process. SETTING: Bus stops from Lima, Peru. We used five images per bus stop. PRIMARY AND SECONDARY OUTCOME MEASURES: Bus stop images were classified according to COVID-19 risk into two labels: moderate or extreme. RESULTS: NASNetLarge outperformed the other CNNs except in the recall metric for the moderate label and in the precision metric for the extreme label; the ResNet152V2 performed better in these two metrics (85% vs 76% and 63% vs 60%, respectively). The NASNetLarge was further tuned. The best recall (75%) and F1 score (65%) for the extreme label were reached with data augmentation techniques. Areas close to buildings or with people were often classified as extreme risk. CONCLUSIONS: This feasibility study showed that CNNs have the potential to classify street images according to levels of COVID-19 risk. In addition to applications in clinical medicine, CNNs and street images could advance the epidemiology of COVID-19 at the population level.
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spelling pubmed-94856482022-09-20 Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis Carrillo-Larco, Rodrigo M Castillo-Cara, Manuel Hernández Santa Cruz, Jose Francisco BMJ Open Global Health OBJECTIVES: During the COVID-19 pandemic, convolutional neural networks (CNNs) have been used in clinical medicine (eg, X-rays classification). Whether CNNs could inform the epidemiology of COVID-19 classifying street images according to COVID-19 risk is unknown, yet it could pinpoint high-risk places and relevant features of the built environment. In a feasibility study, we trained CNNs to classify the area surrounding bus stops (Lima, Peru) into moderate or extreme COVID-19 risk. DESIGN: CNN analysis based on images from bus stops and the surrounding area. We used transfer learning and updated the output layer of five CNNs: NASNetLarge, InceptionResNetV2, Xception, ResNet152V2 and ResNet101V2. We chose the best performing CNN, which was further tuned. We used GradCam to understand the classification process. SETTING: Bus stops from Lima, Peru. We used five images per bus stop. PRIMARY AND SECONDARY OUTCOME MEASURES: Bus stop images were classified according to COVID-19 risk into two labels: moderate or extreme. RESULTS: NASNetLarge outperformed the other CNNs except in the recall metric for the moderate label and in the precision metric for the extreme label; the ResNet152V2 performed better in these two metrics (85% vs 76% and 63% vs 60%, respectively). The NASNetLarge was further tuned. The best recall (75%) and F1 score (65%) for the extreme label were reached with data augmentation techniques. Areas close to buildings or with people were often classified as extreme risk. CONCLUSIONS: This feasibility study showed that CNNs have the potential to classify street images according to levels of COVID-19 risk. In addition to applications in clinical medicine, CNNs and street images could advance the epidemiology of COVID-19 at the population level. BMJ Publishing Group 2022-09-19 /pmc/articles/PMC9485648/ /pubmed/36123096 http://dx.doi.org/10.1136/bmjopen-2022-063411 Text en © Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY. Published by BMJ. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution 4.0 Unported (CC BY 4.0) license, which permits others to copy, redistribute, remix, transform and build upon this work for any purpose, provided the original work is properly cited, a link to the licence is given, and indication of whether changes were made. See: https://creativecommons.org/licenses/by/4.0/.
spellingShingle Global Health
Carrillo-Larco, Rodrigo M
Castillo-Cara, Manuel
Hernández Santa Cruz, Jose Francisco
Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title_full Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title_fullStr Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title_full_unstemmed Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title_short Street images classification according to COVID-19 risk in Lima, Peru: a convolutional neural networks feasibility analysis
title_sort street images classification according to covid-19 risk in lima, peru: a convolutional neural networks feasibility analysis
topic Global Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9485648/
https://www.ncbi.nlm.nih.gov/pubmed/36123096
http://dx.doi.org/10.1136/bmjopen-2022-063411
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