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Lesion segmentation in lung CT scans using unsupervised adversarial learning

Lesion segmentation in medical images is difficult yet crucial for proper diagnosis and treatment. Identifying lesions in medical images is costly and time-consuming and requires highly specialized knowledge. For this reason, supervised and semi-supervised learning techniques have been developed. Ne...

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Autores principales: Sherwani, Moiz Khan, Marzullo, Aldo, De Momi, Elena, Calimeri, Francesco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9486778/
https://www.ncbi.nlm.nih.gov/pubmed/36125656
http://dx.doi.org/10.1007/s11517-022-02651-8
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author Sherwani, Moiz Khan
Marzullo, Aldo
De Momi, Elena
Calimeri, Francesco
author_facet Sherwani, Moiz Khan
Marzullo, Aldo
De Momi, Elena
Calimeri, Francesco
author_sort Sherwani, Moiz Khan
collection PubMed
description Lesion segmentation in medical images is difficult yet crucial for proper diagnosis and treatment. Identifying lesions in medical images is costly and time-consuming and requires highly specialized knowledge. For this reason, supervised and semi-supervised learning techniques have been developed. Nevertheless, the lack of annotated data, which is common in medical imaging, is an issue; in this context, interesting approaches can use unsupervised learning to accurately distinguish between healthy tissues and lesions, training the network without using the annotations. In this work, an unsupervised learning technique is proposed to automatically segment coronavirus disease 2019 (COVID-19) lesions on 2D axial CT lung slices. The proposed approach uses the technique of image translation to generate healthy lung images based on the infected lung image without the need for lesion annotations. Attention masks are used to improve the quality of the segmentation further. Experiments showed the capability of the proposed approaches to segment the lesions, and it outperforms a range of unsupervised lesion detection approaches. The average reported results for the test dataset based on the metrics: Dice Score, Sensitivity, Specificity, Structure Measure, Enhanced-Alignment Measure, and Mean Absolute Error are 0.695, 0.694, 0.961, 0.791, 0.875, and 0.082 respectively. The achieved results are promising compared with the state-of-the-art and could constitute a valuable tool for future developments. GRAPHICAL ABSTRACT: [Image: see text]
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spelling pubmed-94867782022-09-21 Lesion segmentation in lung CT scans using unsupervised adversarial learning Sherwani, Moiz Khan Marzullo, Aldo De Momi, Elena Calimeri, Francesco Med Biol Eng Comput Original Article Lesion segmentation in medical images is difficult yet crucial for proper diagnosis and treatment. Identifying lesions in medical images is costly and time-consuming and requires highly specialized knowledge. For this reason, supervised and semi-supervised learning techniques have been developed. Nevertheless, the lack of annotated data, which is common in medical imaging, is an issue; in this context, interesting approaches can use unsupervised learning to accurately distinguish between healthy tissues and lesions, training the network without using the annotations. In this work, an unsupervised learning technique is proposed to automatically segment coronavirus disease 2019 (COVID-19) lesions on 2D axial CT lung slices. The proposed approach uses the technique of image translation to generate healthy lung images based on the infected lung image without the need for lesion annotations. Attention masks are used to improve the quality of the segmentation further. Experiments showed the capability of the proposed approaches to segment the lesions, and it outperforms a range of unsupervised lesion detection approaches. The average reported results for the test dataset based on the metrics: Dice Score, Sensitivity, Specificity, Structure Measure, Enhanced-Alignment Measure, and Mean Absolute Error are 0.695, 0.694, 0.961, 0.791, 0.875, and 0.082 respectively. The achieved results are promising compared with the state-of-the-art and could constitute a valuable tool for future developments. GRAPHICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-09-20 2022 /pmc/articles/PMC9486778/ /pubmed/36125656 http://dx.doi.org/10.1007/s11517-022-02651-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Sherwani, Moiz Khan
Marzullo, Aldo
De Momi, Elena
Calimeri, Francesco
Lesion segmentation in lung CT scans using unsupervised adversarial learning
title Lesion segmentation in lung CT scans using unsupervised adversarial learning
title_full Lesion segmentation in lung CT scans using unsupervised adversarial learning
title_fullStr Lesion segmentation in lung CT scans using unsupervised adversarial learning
title_full_unstemmed Lesion segmentation in lung CT scans using unsupervised adversarial learning
title_short Lesion segmentation in lung CT scans using unsupervised adversarial learning
title_sort lesion segmentation in lung ct scans using unsupervised adversarial learning
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9486778/
https://www.ncbi.nlm.nih.gov/pubmed/36125656
http://dx.doi.org/10.1007/s11517-022-02651-8
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