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Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout

Hyperuricemia and gout are two of the most common metabolic disorders worldwide; their incidence is increasing with changes in lifestyle, and they are correlated with many diseases, including renal and cardiovascular diseases. The majority of studies on hyperuricemia and gout have focused on the dis...

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Autores principales: Huang, Chung-Ming, Chen, Yu-Chia, Lai, I-Lu, Chen, Hong-Da, Huang, Po-Hao, Tu, Siang-Jyun, Lee, Ya-Ting, Yen, Ju-Chen, Lin, Chia-Li, Liu, Ting-Yuan, Chang, Jan-Gowth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9487523/
https://www.ncbi.nlm.nih.gov/pubmed/36148448
http://dx.doi.org/10.3389/fmed.2022.889464
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author Huang, Chung-Ming
Chen, Yu-Chia
Lai, I-Lu
Chen, Hong-Da
Huang, Po-Hao
Tu, Siang-Jyun
Lee, Ya-Ting
Yen, Ju-Chen
Lin, Chia-Li
Liu, Ting-Yuan
Chang, Jan-Gowth
author_facet Huang, Chung-Ming
Chen, Yu-Chia
Lai, I-Lu
Chen, Hong-Da
Huang, Po-Hao
Tu, Siang-Jyun
Lee, Ya-Ting
Yen, Ju-Chen
Lin, Chia-Li
Liu, Ting-Yuan
Chang, Jan-Gowth
author_sort Huang, Chung-Ming
collection PubMed
description Hyperuricemia and gout are two of the most common metabolic disorders worldwide; their incidence is increasing with changes in lifestyle, and they are correlated with many diseases, including renal and cardiovascular diseases. The majority of studies on hyperuricemia and gout have focused on the discovery of the associated genes and their functions and on the roles of monocytes and neutrophils in the development of gout. Virtually no studies investigating the epigenomics of gout disease or exploring the clinical significance of such research have been conducted. In this study, we observed that the expression of enzymes involved in RNA modifications or RNA editing was affected in uric acid (UA)- or monosodium urate (MSU)-treated cell lines. RNA alternative splicing and splicing factors were also affected by UA or MSU treatment. We used transcriptome sequencing to analyze genome-wide RNA splicing and RNA editing and found significant changes in RNA splicing and RNA editing in MSU- or UA-treated THP-1 and HEK293 cells. We further found significant changes of RNA modifications, editing, and splicing in patients with gout. The data indicate that RNA modifications, editing, and splicing play roles in gout. The findings of this study may help to understand the mechanism of RNA splicing and modifications in gout, facilitating the development of new diagnostic and therapeutic strategies.
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spelling pubmed-94875232022-09-21 Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout Huang, Chung-Ming Chen, Yu-Chia Lai, I-Lu Chen, Hong-Da Huang, Po-Hao Tu, Siang-Jyun Lee, Ya-Ting Yen, Ju-Chen Lin, Chia-Li Liu, Ting-Yuan Chang, Jan-Gowth Front Med (Lausanne) Medicine Hyperuricemia and gout are two of the most common metabolic disorders worldwide; their incidence is increasing with changes in lifestyle, and they are correlated with many diseases, including renal and cardiovascular diseases. The majority of studies on hyperuricemia and gout have focused on the discovery of the associated genes and their functions and on the roles of monocytes and neutrophils in the development of gout. Virtually no studies investigating the epigenomics of gout disease or exploring the clinical significance of such research have been conducted. In this study, we observed that the expression of enzymes involved in RNA modifications or RNA editing was affected in uric acid (UA)- or monosodium urate (MSU)-treated cell lines. RNA alternative splicing and splicing factors were also affected by UA or MSU treatment. We used transcriptome sequencing to analyze genome-wide RNA splicing and RNA editing and found significant changes in RNA splicing and RNA editing in MSU- or UA-treated THP-1 and HEK293 cells. We further found significant changes of RNA modifications, editing, and splicing in patients with gout. The data indicate that RNA modifications, editing, and splicing play roles in gout. The findings of this study may help to understand the mechanism of RNA splicing and modifications in gout, facilitating the development of new diagnostic and therapeutic strategies. Frontiers Media S.A. 2022-09-06 /pmc/articles/PMC9487523/ /pubmed/36148448 http://dx.doi.org/10.3389/fmed.2022.889464 Text en Copyright © 2022 Huang, Chen, Lai, Chen, Huang, Tu, Lee, Yen, Lin, Liu and Chang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Huang, Chung-Ming
Chen, Yu-Chia
Lai, I-Lu
Chen, Hong-Da
Huang, Po-Hao
Tu, Siang-Jyun
Lee, Ya-Ting
Yen, Ju-Chen
Lin, Chia-Li
Liu, Ting-Yuan
Chang, Jan-Gowth
Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title_full Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title_fullStr Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title_full_unstemmed Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title_short Exploring RNA modifications, editing, and splicing changes in hyperuricemia and gout
title_sort exploring rna modifications, editing, and splicing changes in hyperuricemia and gout
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9487523/
https://www.ncbi.nlm.nih.gov/pubmed/36148448
http://dx.doi.org/10.3389/fmed.2022.889464
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