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A GPU-accelerated compute framework for pathogen genomic variant identification to aid genomic epidemiology of infectious disease: a malaria case study
As recently demonstrated by the COVID-19 pandemic, large-scale pathogen genomic data are crucial to characterize transmission patterns of human infectious diseases. Yet, current methods to process raw sequence data into analysis-ready variants remain slow to scale, hampering rapid surveillance effor...
Autores principales: | Carpi, Giovanna, Gorenstein, Lev, Harkins, Timothy T, Samadi, Mehrzad, Vats, Pankaj |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9487672/ https://www.ncbi.nlm.nih.gov/pubmed/35945154 http://dx.doi.org/10.1093/bib/bbac314 |
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