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Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing

Postoperative recurrence of colorectal cancer (CRC) eventually leads to therapeutic failure; therefore, treatment strategies based on accurate prediction of recurrence are urgently required. To identify biomarkers that can predict treatment outcomes, we compared the mutational profiles of surgically...

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Autores principales: Kishigami, Fumishi, Tanaka, Yosuke, Yamamoto, Yoko, Ueno, Toshihide, Kojima, Shinya, Sato, Kazuhito, Inoue, Satoshi, Sugaya, Saori, Ishihara, Soichiro, Mano, Hiroyuki, Kawazu, Masahito
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9487878/
https://www.ncbi.nlm.nih.gov/pubmed/35343095
http://dx.doi.org/10.1002/cam4.4710
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author Kishigami, Fumishi
Tanaka, Yosuke
Yamamoto, Yoko
Ueno, Toshihide
Kojima, Shinya
Sato, Kazuhito
Inoue, Satoshi
Sugaya, Saori
Ishihara, Soichiro
Mano, Hiroyuki
Kawazu, Masahito
author_facet Kishigami, Fumishi
Tanaka, Yosuke
Yamamoto, Yoko
Ueno, Toshihide
Kojima, Shinya
Sato, Kazuhito
Inoue, Satoshi
Sugaya, Saori
Ishihara, Soichiro
Mano, Hiroyuki
Kawazu, Masahito
author_sort Kishigami, Fumishi
collection PubMed
description Postoperative recurrence of colorectal cancer (CRC) eventually leads to therapeutic failure; therefore, treatment strategies based on accurate prediction of recurrence are urgently required. To identify biomarkers that can predict treatment outcomes, we compared the mutational profiles of surgically resected specimens from patients with recurrent cancer with those from patients with non‐recurrent cancer. Target sequencing, whole‐exome sequencing (WES), or whole‐genome sequencing (WGS) was performed on 89 and 58 tumors from recurrent and non‐recurrent cases, respectively. WGS revealed the driver mutations that were not detected with target sequencing or WES, including the structural variations affecting ZFP36L2. Loss of function of ZFP36L2 was frequently observed in primary tumors from recurrent cases. Furthermore, the recurrence‐free survival of patients with loss of function of ZFP36L2 was significantly shorter relative to patients with no loss of ZFP36L2 function. In summary, the study demonstrated that detailed genomic analysis could help improve precision medicine for CRC.
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spelling pubmed-94878782022-09-30 Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing Kishigami, Fumishi Tanaka, Yosuke Yamamoto, Yoko Ueno, Toshihide Kojima, Shinya Sato, Kazuhito Inoue, Satoshi Sugaya, Saori Ishihara, Soichiro Mano, Hiroyuki Kawazu, Masahito Cancer Med RESEARCH ARTICLES Postoperative recurrence of colorectal cancer (CRC) eventually leads to therapeutic failure; therefore, treatment strategies based on accurate prediction of recurrence are urgently required. To identify biomarkers that can predict treatment outcomes, we compared the mutational profiles of surgically resected specimens from patients with recurrent cancer with those from patients with non‐recurrent cancer. Target sequencing, whole‐exome sequencing (WES), or whole‐genome sequencing (WGS) was performed on 89 and 58 tumors from recurrent and non‐recurrent cases, respectively. WGS revealed the driver mutations that were not detected with target sequencing or WES, including the structural variations affecting ZFP36L2. Loss of function of ZFP36L2 was frequently observed in primary tumors from recurrent cases. Furthermore, the recurrence‐free survival of patients with loss of function of ZFP36L2 was significantly shorter relative to patients with no loss of ZFP36L2 function. In summary, the study demonstrated that detailed genomic analysis could help improve precision medicine for CRC. John Wiley and Sons Inc. 2022-03-28 /pmc/articles/PMC9487878/ /pubmed/35343095 http://dx.doi.org/10.1002/cam4.4710 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle RESEARCH ARTICLES
Kishigami, Fumishi
Tanaka, Yosuke
Yamamoto, Yoko
Ueno, Toshihide
Kojima, Shinya
Sato, Kazuhito
Inoue, Satoshi
Sugaya, Saori
Ishihara, Soichiro
Mano, Hiroyuki
Kawazu, Masahito
Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title_full Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title_fullStr Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title_full_unstemmed Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title_short Exploration of predictive biomarkers for postoperative recurrence of stage II/III colorectal cancer using genomic sequencing
title_sort exploration of predictive biomarkers for postoperative recurrence of stage ii/iii colorectal cancer using genomic sequencing
topic RESEARCH ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9487878/
https://www.ncbi.nlm.nih.gov/pubmed/35343095
http://dx.doi.org/10.1002/cam4.4710
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