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An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation

Infectious disease modelling can serve as a powerful tool for situational awareness and decision support for policy makers. However, COVID-19 modelling efforts faced many challenges, from poor data quality to changing policy and human behaviour. To extract practical insight from the large body of CO...

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Autores principales: Nixon, Kristen, Jindal, Sonia, Parker, Felix, Reich, Nicholas G, Ghobadi, Kimia, Lee, Elizabeth C, Truelove, Shaun, Gardner, Lauren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9489063/
https://www.ncbi.nlm.nih.gov/pubmed/36150782
http://dx.doi.org/10.1016/S2589-7500(22)00148-0
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author Nixon, Kristen
Jindal, Sonia
Parker, Felix
Reich, Nicholas G
Ghobadi, Kimia
Lee, Elizabeth C
Truelove, Shaun
Gardner, Lauren
author_facet Nixon, Kristen
Jindal, Sonia
Parker, Felix
Reich, Nicholas G
Ghobadi, Kimia
Lee, Elizabeth C
Truelove, Shaun
Gardner, Lauren
author_sort Nixon, Kristen
collection PubMed
description Infectious disease modelling can serve as a powerful tool for situational awareness and decision support for policy makers. However, COVID-19 modelling efforts faced many challenges, from poor data quality to changing policy and human behaviour. To extract practical insight from the large body of COVID-19 modelling literature available, we provide a narrative review with a systematic approach that quantitatively assessed prospective, data-driven modelling studies of COVID-19 in the USA. We analysed 136 papers, and focused on the aspects of models that are essential for decision makers. We have documented the forecasting window, methodology, prediction target, datasets used, and geographical resolution for each study. We also found that a large fraction of papers did not evaluate performance (25%), express uncertainty (50%), or state limitations (36%). To remedy some of these identified gaps, we recommend the adoption of the EPIFORGE 2020 model reporting guidelines and creating an information-sharing system that is suitable for fast-paced infectious disease outbreak science.
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spelling pubmed-94890632022-09-21 An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation Nixon, Kristen Jindal, Sonia Parker, Felix Reich, Nicholas G Ghobadi, Kimia Lee, Elizabeth C Truelove, Shaun Gardner, Lauren Lancet Digit Health Series Infectious disease modelling can serve as a powerful tool for situational awareness and decision support for policy makers. However, COVID-19 modelling efforts faced many challenges, from poor data quality to changing policy and human behaviour. To extract practical insight from the large body of COVID-19 modelling literature available, we provide a narrative review with a systematic approach that quantitatively assessed prospective, data-driven modelling studies of COVID-19 in the USA. We analysed 136 papers, and focused on the aspects of models that are essential for decision makers. We have documented the forecasting window, methodology, prediction target, datasets used, and geographical resolution for each study. We also found that a large fraction of papers did not evaluate performance (25%), express uncertainty (50%), or state limitations (36%). To remedy some of these identified gaps, we recommend the adoption of the EPIFORGE 2020 model reporting guidelines and creating an information-sharing system that is suitable for fast-paced infectious disease outbreak science. The Author(s). Published by Elsevier Ltd. 2022-10 2022-09-20 /pmc/articles/PMC9489063/ /pubmed/36150782 http://dx.doi.org/10.1016/S2589-7500(22)00148-0 Text en © 2022 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Series
Nixon, Kristen
Jindal, Sonia
Parker, Felix
Reich, Nicholas G
Ghobadi, Kimia
Lee, Elizabeth C
Truelove, Shaun
Gardner, Lauren
An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title_full An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title_fullStr An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title_full_unstemmed An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title_short An evaluation of prospective COVID-19 modelling studies in the USA: from data to science translation
title_sort evaluation of prospective covid-19 modelling studies in the usa: from data to science translation
topic Series
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9489063/
https://www.ncbi.nlm.nih.gov/pubmed/36150782
http://dx.doi.org/10.1016/S2589-7500(22)00148-0
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