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Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves

Rapid determination of chlorophyll content is significant for evaluating cotton's nutritional and physiological status. Hyperspectral technology equipped with multivariate analysis methods has been widely used for chlorophyll content detection. However, the model developed on one batch or varie...

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Autores principales: Xiao, Qinlin, Tang, Wentan, Zhang, Chu, Zhou, Lei, Feng, Lei, Shen, Jianxun, Yan, Tianying, Gao, Pan, He, Yong, Wu, Na
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9489230/
https://www.ncbi.nlm.nih.gov/pubmed/36158530
http://dx.doi.org/10.34133/2022/9813841
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author Xiao, Qinlin
Tang, Wentan
Zhang, Chu
Zhou, Lei
Feng, Lei
Shen, Jianxun
Yan, Tianying
Gao, Pan
He, Yong
Wu, Na
author_facet Xiao, Qinlin
Tang, Wentan
Zhang, Chu
Zhou, Lei
Feng, Lei
Shen, Jianxun
Yan, Tianying
Gao, Pan
He, Yong
Wu, Na
author_sort Xiao, Qinlin
collection PubMed
description Rapid determination of chlorophyll content is significant for evaluating cotton's nutritional and physiological status. Hyperspectral technology equipped with multivariate analysis methods has been widely used for chlorophyll content detection. However, the model developed on one batch or variety cannot produce the same effect for another due to variations, such as samples and measurement conditions. Considering that it is costly to establish models for each batch or variety, the feasibility of using spectral preprocessing combined with deep transfer learning for model transfer was explored. Seven different spectral preprocessing methods were discussed, and a self-designed convolutional neural network (CNN) was developed to build models and conduct transfer tasks by fine-tuning. The approach combined first-derivative (FD) and standard normal variate transformation (SNV) was chosen as the best pretreatment. For the dataset of the target domain, fine-tuned CNN based on spectra processed by FD + SNV outperformed conventional partial least squares (PLS) and squares-support vector machine regression (SVR). Although the performance of fine-tuned CNN with a smaller dataset was slightly lower, it was still better than conventional models and achieved satisfactory results. Ensemble preprocessing combined with deep transfer learning could be an effective approach to estimate the chlorophyll content between different cotton varieties, offering a new possibility for evaluating the nutritional status of cotton in the field.
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spelling pubmed-94892302022-09-23 Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves Xiao, Qinlin Tang, Wentan Zhang, Chu Zhou, Lei Feng, Lei Shen, Jianxun Yan, Tianying Gao, Pan He, Yong Wu, Na Plant Phenomics Research Article Rapid determination of chlorophyll content is significant for evaluating cotton's nutritional and physiological status. Hyperspectral technology equipped with multivariate analysis methods has been widely used for chlorophyll content detection. However, the model developed on one batch or variety cannot produce the same effect for another due to variations, such as samples and measurement conditions. Considering that it is costly to establish models for each batch or variety, the feasibility of using spectral preprocessing combined with deep transfer learning for model transfer was explored. Seven different spectral preprocessing methods were discussed, and a self-designed convolutional neural network (CNN) was developed to build models and conduct transfer tasks by fine-tuning. The approach combined first-derivative (FD) and standard normal variate transformation (SNV) was chosen as the best pretreatment. For the dataset of the target domain, fine-tuned CNN based on spectra processed by FD + SNV outperformed conventional partial least squares (PLS) and squares-support vector machine regression (SVR). Although the performance of fine-tuned CNN with a smaller dataset was slightly lower, it was still better than conventional models and achieved satisfactory results. Ensemble preprocessing combined with deep transfer learning could be an effective approach to estimate the chlorophyll content between different cotton varieties, offering a new possibility for evaluating the nutritional status of cotton in the field. AAAS 2022-08-16 /pmc/articles/PMC9489230/ /pubmed/36158530 http://dx.doi.org/10.34133/2022/9813841 Text en Copyright © 2022 Qinlin Xiao et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Nanjing Agricultural University. Distributed under a Creative Commons Attribution License (CC BY 4.0).
spellingShingle Research Article
Xiao, Qinlin
Tang, Wentan
Zhang, Chu
Zhou, Lei
Feng, Lei
Shen, Jianxun
Yan, Tianying
Gao, Pan
He, Yong
Wu, Na
Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title_full Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title_fullStr Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title_full_unstemmed Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title_short Spectral Preprocessing Combined with Deep Transfer Learning to Evaluate Chlorophyll Content in Cotton Leaves
title_sort spectral preprocessing combined with deep transfer learning to evaluate chlorophyll content in cotton leaves
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9489230/
https://www.ncbi.nlm.nih.gov/pubmed/36158530
http://dx.doi.org/10.34133/2022/9813841
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