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NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes

Acute myeloid leukemia (AML) is the most heterogeneous hematological disorder and blast cells need to fight against immune system. Natural killer (NK) cells can elicit fast anti-tumor responses in response to surface receptors of tumor cells. NK-cell activity is often impaired in the disease, and th...

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Autores principales: Turk, Seyhan, Baesmat, Ayriana Safari, Yılmaz, Aysegul, Turk, Can, Malkan, Umit Yavuz, Ucar, Gulberk, Haznedaroğlu, Ibrahim Celalettin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9490854/
https://www.ncbi.nlm.nih.gov/pubmed/36213442
http://dx.doi.org/10.1515/med-2022-0551
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author Turk, Seyhan
Baesmat, Ayriana Safari
Yılmaz, Aysegul
Turk, Can
Malkan, Umit Yavuz
Ucar, Gulberk
Haznedaroğlu, Ibrahim Celalettin
author_facet Turk, Seyhan
Baesmat, Ayriana Safari
Yılmaz, Aysegul
Turk, Can
Malkan, Umit Yavuz
Ucar, Gulberk
Haznedaroğlu, Ibrahim Celalettin
author_sort Turk, Seyhan
collection PubMed
description Acute myeloid leukemia (AML) is the most heterogeneous hematological disorder and blast cells need to fight against immune system. Natural killer (NK) cells can elicit fast anti-tumor responses in response to surface receptors of tumor cells. NK-cell activity is often impaired in the disease, and there is a risk of insufficient tumor suppression and progression. The aim of this study is to assess the dysfunction of NK cells in AML patients via focusing on two important pathways. We obtained single-cell RNA-sequencing data from NK cells obtained from healthy donors and AML patients. The data were used to perform a wide variety of approaches, including DESeq2 (version 3.9), limma (version 3.26.8) power differential expression analyses, hierarchical clustering, gene set enrichment, and pathway analysis. ATP6AP2, LNPEP, PREP, IGF2R, CTSA, and THOP1 genes were found to be related to the renin–angiotensin system (RAS) family, while DPP3, GLRA3, CRCP, CHRNA5, CHRNE, and CHRNB1 genes were associated with the neurotransmitter pathways. The determined genes are expressed within different patterns in the AML and healthy groups. The relevant molecular pathways and clusters of genes were identified, as well. The cross-talks of NK-cell dysfunction in relation to the RAS and neurotransmitters seem to be important in the genesis of AML.
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spelling pubmed-94908542022-10-07 NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes Turk, Seyhan Baesmat, Ayriana Safari Yılmaz, Aysegul Turk, Can Malkan, Umit Yavuz Ucar, Gulberk Haznedaroğlu, Ibrahim Celalettin Open Med (Wars) Research Article Acute myeloid leukemia (AML) is the most heterogeneous hematological disorder and blast cells need to fight against immune system. Natural killer (NK) cells can elicit fast anti-tumor responses in response to surface receptors of tumor cells. NK-cell activity is often impaired in the disease, and there is a risk of insufficient tumor suppression and progression. The aim of this study is to assess the dysfunction of NK cells in AML patients via focusing on two important pathways. We obtained single-cell RNA-sequencing data from NK cells obtained from healthy donors and AML patients. The data were used to perform a wide variety of approaches, including DESeq2 (version 3.9), limma (version 3.26.8) power differential expression analyses, hierarchical clustering, gene set enrichment, and pathway analysis. ATP6AP2, LNPEP, PREP, IGF2R, CTSA, and THOP1 genes were found to be related to the renin–angiotensin system (RAS) family, while DPP3, GLRA3, CRCP, CHRNA5, CHRNE, and CHRNB1 genes were associated with the neurotransmitter pathways. The determined genes are expressed within different patterns in the AML and healthy groups. The relevant molecular pathways and clusters of genes were identified, as well. The cross-talks of NK-cell dysfunction in relation to the RAS and neurotransmitters seem to be important in the genesis of AML. De Gruyter 2022-09-20 /pmc/articles/PMC9490854/ /pubmed/36213442 http://dx.doi.org/10.1515/med-2022-0551 Text en © 2022 Seyhan Turk et al., published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Turk, Seyhan
Baesmat, Ayriana Safari
Yılmaz, Aysegul
Turk, Can
Malkan, Umit Yavuz
Ucar, Gulberk
Haznedaroğlu, Ibrahim Celalettin
NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title_full NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title_fullStr NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title_full_unstemmed NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title_short NK-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
title_sort nk-cell dysfunction of acute myeloid leukemia in relation to the renin–angiotensin system and neurotransmitter genes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9490854/
https://www.ncbi.nlm.nih.gov/pubmed/36213442
http://dx.doi.org/10.1515/med-2022-0551
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