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A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer
Breast cancer is the most common malignancy in women, and there is evidence for the dual role of cell pyroptosis in tumor development. However, little is known about the relationship between cell pyroptosis and breast cancer and its prognostic value. We aimed to construct a prognostic model using ce...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9491236/ https://www.ncbi.nlm.nih.gov/pubmed/36158689 http://dx.doi.org/10.3389/fonc.2022.961500 |
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author | Wang, Cheng Zhang, Liyong Ren, Lin Zhang, Guozhi Wan, Andi Xiong, Siyi Tian, Hao Peng, Zaihui Zhao, Tingting Gao, Pingping Sun, Na Zhang, Yi Qi, Xiaowei |
author_facet | Wang, Cheng Zhang, Liyong Ren, Lin Zhang, Guozhi Wan, Andi Xiong, Siyi Tian, Hao Peng, Zaihui Zhao, Tingting Gao, Pingping Sun, Na Zhang, Yi Qi, Xiaowei |
author_sort | Wang, Cheng |
collection | PubMed |
description | Breast cancer is the most common malignancy in women, and there is evidence for the dual role of cell pyroptosis in tumor development. However, little is known about the relationship between cell pyroptosis and breast cancer and its prognostic value. We aimed to construct a prognostic model using cell-pyroptosis-related genes to provide innovative insights into the prognosis and treatment of breast cancer. We screened candidate genes for pyroptosis using public databases and identified 10 cell pyroptosis signature genes with the random forest method. Finally, a nomogram for predicting 1-, 3-, and 5-year survival probabilities was constructed. The differences in immune cell distributions between survival periods were similar across the breast cancer datasets. The 10 identified key pyroptosis factors showed a significant correlation with Her2, tumor–node–metastasis (TNM) stage, and survival of breast cancer. The risk scores correlated positively with the infiltration features of naive B cells, CD8+ T cells, atpdelnd mast cells, while they correlated negatively with those of M0 macrophages and dendritic cells. In conclusion, our findings confirm that cell pyroptosis is closely associated with breast cancer. Importantly, the prognostic complex values generated from the 10 cell-pyroptosis-related genes based on various clinical features may provide an important basis for future studies on the prognosis of breast cancer. |
format | Online Article Text |
id | pubmed-9491236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94912362022-09-22 A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer Wang, Cheng Zhang, Liyong Ren, Lin Zhang, Guozhi Wan, Andi Xiong, Siyi Tian, Hao Peng, Zaihui Zhao, Tingting Gao, Pingping Sun, Na Zhang, Yi Qi, Xiaowei Front Oncol Oncology Breast cancer is the most common malignancy in women, and there is evidence for the dual role of cell pyroptosis in tumor development. However, little is known about the relationship between cell pyroptosis and breast cancer and its prognostic value. We aimed to construct a prognostic model using cell-pyroptosis-related genes to provide innovative insights into the prognosis and treatment of breast cancer. We screened candidate genes for pyroptosis using public databases and identified 10 cell pyroptosis signature genes with the random forest method. Finally, a nomogram for predicting 1-, 3-, and 5-year survival probabilities was constructed. The differences in immune cell distributions between survival periods were similar across the breast cancer datasets. The 10 identified key pyroptosis factors showed a significant correlation with Her2, tumor–node–metastasis (TNM) stage, and survival of breast cancer. The risk scores correlated positively with the infiltration features of naive B cells, CD8+ T cells, atpdelnd mast cells, while they correlated negatively with those of M0 macrophages and dendritic cells. In conclusion, our findings confirm that cell pyroptosis is closely associated with breast cancer. Importantly, the prognostic complex values generated from the 10 cell-pyroptosis-related genes based on various clinical features may provide an important basis for future studies on the prognosis of breast cancer. Frontiers Media S.A. 2022-09-07 /pmc/articles/PMC9491236/ /pubmed/36158689 http://dx.doi.org/10.3389/fonc.2022.961500 Text en Copyright © 2022 Wang, Zhang, Ren, Zhang, Wan, Xiong, Tian, Peng, Zhao, Gao, Sun, Zhang and Qi https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Wang, Cheng Zhang, Liyong Ren, Lin Zhang, Guozhi Wan, Andi Xiong, Siyi Tian, Hao Peng, Zaihui Zhao, Tingting Gao, Pingping Sun, Na Zhang, Yi Qi, Xiaowei A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title | A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title_full | A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title_fullStr | A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title_full_unstemmed | A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title_short | A novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
title_sort | novel pyroptosis-related indicator of immune infiltration features and prognosis in breast cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9491236/ https://www.ncbi.nlm.nih.gov/pubmed/36158689 http://dx.doi.org/10.3389/fonc.2022.961500 |
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