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Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation

BACKGROUND: There is a growing demand globally for emergency department (ED) services. An increase in ED visits has resulted in overcrowding and longer waiting times. The triage process plays a crucial role in assessing and stratifying patients’ risks and ensuring that the critically ill promptly re...

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Autores principales: Liu, Nan, Xie, Feng, Siddiqui, Fahad Javaid, Ho, Andrew Fu Wah, Chakraborty, Bibhas, Nadarajan, Gayathri Devi, Tan, Kenneth Boon Kiat, Ong, Marcus Eng Hock
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9492092/
https://www.ncbi.nlm.nih.gov/pubmed/35333179
http://dx.doi.org/10.2196/34201
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author Liu, Nan
Xie, Feng
Siddiqui, Fahad Javaid
Ho, Andrew Fu Wah
Chakraborty, Bibhas
Nadarajan, Gayathri Devi
Tan, Kenneth Boon Kiat
Ong, Marcus Eng Hock
author_facet Liu, Nan
Xie, Feng
Siddiqui, Fahad Javaid
Ho, Andrew Fu Wah
Chakraborty, Bibhas
Nadarajan, Gayathri Devi
Tan, Kenneth Boon Kiat
Ong, Marcus Eng Hock
author_sort Liu, Nan
collection PubMed
description BACKGROUND: There is a growing demand globally for emergency department (ED) services. An increase in ED visits has resulted in overcrowding and longer waiting times. The triage process plays a crucial role in assessing and stratifying patients’ risks and ensuring that the critically ill promptly receive appropriate priority and emergency treatment. A substantial amount of research has been conducted on the use of machine learning tools to construct triage and risk prediction models; however, the black box nature of these models has limited their clinical application and interpretation. OBJECTIVE: In this study, we plan to develop an innovative, dynamic, and interpretable System for Emergency Risk Triage (SERT) for risk stratification in the ED by leveraging large-scale electronic health records (EHRs) and machine learning. METHODS: To achieve this objective, we will conduct a retrospective, single-center study based on a large, longitudinal data set obtained from the EHRs of the largest tertiary hospital in Singapore. Study outcomes include adverse events experienced by patients, such as the need for an intensive care unit and inpatient death. With preidentified candidate variables drawn from expert opinions and relevant literature, we will apply an interpretable machine learning–based AutoScore to develop 3 SERT scores. These 3 scores can be used at different times in the ED, that is, on arrival, during ED stay, and at admission. Furthermore, we will compare our novel SERT scores with established clinical scores and previously described black box machine learning models as baselines. Receiver operating characteristic analysis will be conducted on the testing cohorts for performance evaluation. RESULTS: The study is currently being conducted. The extracted data indicate approximately 1.8 million ED visits by over 810,000 unique patients. Modelling results are expected to be published in 2022. CONCLUSIONS: The SERT scoring system proposed in this study will be unique and innovative because of its dynamic nature and modelling transparency. If successfully validated, our proposed solution will establish a standard for data processing and modelling by taking advantage of large-scale EHRs and interpretable machine learning tools. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/34201
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spelling pubmed-94920922022-09-22 Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation Liu, Nan Xie, Feng Siddiqui, Fahad Javaid Ho, Andrew Fu Wah Chakraborty, Bibhas Nadarajan, Gayathri Devi Tan, Kenneth Boon Kiat Ong, Marcus Eng Hock JMIR Res Protoc Protocol BACKGROUND: There is a growing demand globally for emergency department (ED) services. An increase in ED visits has resulted in overcrowding and longer waiting times. The triage process plays a crucial role in assessing and stratifying patients’ risks and ensuring that the critically ill promptly receive appropriate priority and emergency treatment. A substantial amount of research has been conducted on the use of machine learning tools to construct triage and risk prediction models; however, the black box nature of these models has limited their clinical application and interpretation. OBJECTIVE: In this study, we plan to develop an innovative, dynamic, and interpretable System for Emergency Risk Triage (SERT) for risk stratification in the ED by leveraging large-scale electronic health records (EHRs) and machine learning. METHODS: To achieve this objective, we will conduct a retrospective, single-center study based on a large, longitudinal data set obtained from the EHRs of the largest tertiary hospital in Singapore. Study outcomes include adverse events experienced by patients, such as the need for an intensive care unit and inpatient death. With preidentified candidate variables drawn from expert opinions and relevant literature, we will apply an interpretable machine learning–based AutoScore to develop 3 SERT scores. These 3 scores can be used at different times in the ED, that is, on arrival, during ED stay, and at admission. Furthermore, we will compare our novel SERT scores with established clinical scores and previously described black box machine learning models as baselines. Receiver operating characteristic analysis will be conducted on the testing cohorts for performance evaluation. RESULTS: The study is currently being conducted. The extracted data indicate approximately 1.8 million ED visits by over 810,000 unique patients. Modelling results are expected to be published in 2022. CONCLUSIONS: The SERT scoring system proposed in this study will be unique and innovative because of its dynamic nature and modelling transparency. If successfully validated, our proposed solution will establish a standard for data processing and modelling by taking advantage of large-scale EHRs and interpretable machine learning tools. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/34201 JMIR Publications 2022-03-25 /pmc/articles/PMC9492092/ /pubmed/35333179 http://dx.doi.org/10.2196/34201 Text en ©Nan Liu, Feng Xie, Fahad Javaid Siddiqui, Andrew Fu Wah Ho, Bibhas Chakraborty, Gayathri Devi Nadarajan, Kenneth Boon Kiat Tan, Marcus Eng Hock Ong. Originally published in JMIR Research Protocols (https://www.researchprotocols.org), 25.03.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Research Protocols, is properly cited. The complete bibliographic information, a link to the original publication on https://www.researchprotocols.org, as well as this copyright and license information must be included.
spellingShingle Protocol
Liu, Nan
Xie, Feng
Siddiqui, Fahad Javaid
Ho, Andrew Fu Wah
Chakraborty, Bibhas
Nadarajan, Gayathri Devi
Tan, Kenneth Boon Kiat
Ong, Marcus Eng Hock
Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title_full Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title_fullStr Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title_full_unstemmed Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title_short Leveraging Large-Scale Electronic Health Records and Interpretable Machine Learning for Clinical Decision Making at the Emergency Department: Protocol for System Development and Validation
title_sort leveraging large-scale electronic health records and interpretable machine learning for clinical decision making at the emergency department: protocol for system development and validation
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9492092/
https://www.ncbi.nlm.nih.gov/pubmed/35333179
http://dx.doi.org/10.2196/34201
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