Cargando…
Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction
Spot blotch disease of wheat, caused by the fungus Bipolaris sorokiniana (Sacc.) Shoem., produces several toxins which interact with the plants and thereby increase the blightening of the wheat leaves, and Bipolaroxin is one of them. There is an urgent need to decipher the molecular interaction betw...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9495435/ https://www.ncbi.nlm.nih.gov/pubmed/36139828 http://dx.doi.org/10.3390/antiox11091754 |
_version_ | 1784794017544798208 |
---|---|
author | Malviya, Deepti Singh, Udai B. Dehury, Budheswar Singh, Prakash Kumar, Manoj Singh, Shailendra Chaurasia, Anurag Yadav, Manoj Kumar Shankar, Raja Roy, Manish Rai, Jai P. Mukherjee, Arup K. Solanki, Ishwar Singh Kumar, Arun Kumar, Sunil Singh, Harsh V. |
author_facet | Malviya, Deepti Singh, Udai B. Dehury, Budheswar Singh, Prakash Kumar, Manoj Singh, Shailendra Chaurasia, Anurag Yadav, Manoj Kumar Shankar, Raja Roy, Manish Rai, Jai P. Mukherjee, Arup K. Solanki, Ishwar Singh Kumar, Arun Kumar, Sunil Singh, Harsh V. |
author_sort | Malviya, Deepti |
collection | PubMed |
description | Spot blotch disease of wheat, caused by the fungus Bipolaris sorokiniana (Sacc.) Shoem., produces several toxins which interact with the plants and thereby increase the blightening of the wheat leaves, and Bipolaroxin is one of them. There is an urgent need to decipher the molecular interaction between wheat and the toxin Bipolaroxin for in-depth understanding of host–pathogen interactions. In the present study, we have developed the three-dimensional structure of G-protein alpha subunit from Triticum aestivum. Molecular docking studies were performed using the active site of the modeled G-protein alpha and cryo-EM structure of beta subunit from T. aestivum and ‘Bipolaroxin’. The study of protein–ligand interactions revealed that six H-bonds are mainly formed by Glu29, Ser30, Lys32, and Ala177 of G-alpha with Bipolaroxin. In the beta subunit, the residues of the core beta strand domain participate in the ligand interaction where Lys256, Phe306, and Leu352 formed seven H-bonds with the ligand Bipolaroxin. All-atoms molecular dynamics (MD) simulation studies were conducted for G-alpha and -beta subunit and Bipolaroxin complexes to explore the stability, conformational flexibility, and dynamic behavior of the complex system. In planta studies clearly indicated that application of Bipolaroxin significantly impacted the physio-biochemical pathways in wheat and led to the blightening of leaves in susceptible cultivars as compared to resistant ones. Further, it interacted with the Gα and Gβ subunits of G-protein, phenylpropanoid, and MAPK pathways, which is clearly supported by the qPCR results. This study gives deeper insights into understanding the molecular dialogues between Bipolaroxin and the Gα and Gβ subunits of the wheat heterotrimeric G-protein during host–pathogen interaction. |
format | Online Article Text |
id | pubmed-9495435 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94954352022-09-23 Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction Malviya, Deepti Singh, Udai B. Dehury, Budheswar Singh, Prakash Kumar, Manoj Singh, Shailendra Chaurasia, Anurag Yadav, Manoj Kumar Shankar, Raja Roy, Manish Rai, Jai P. Mukherjee, Arup K. Solanki, Ishwar Singh Kumar, Arun Kumar, Sunil Singh, Harsh V. Antioxidants (Basel) Article Spot blotch disease of wheat, caused by the fungus Bipolaris sorokiniana (Sacc.) Shoem., produces several toxins which interact with the plants and thereby increase the blightening of the wheat leaves, and Bipolaroxin is one of them. There is an urgent need to decipher the molecular interaction between wheat and the toxin Bipolaroxin for in-depth understanding of host–pathogen interactions. In the present study, we have developed the three-dimensional structure of G-protein alpha subunit from Triticum aestivum. Molecular docking studies were performed using the active site of the modeled G-protein alpha and cryo-EM structure of beta subunit from T. aestivum and ‘Bipolaroxin’. The study of protein–ligand interactions revealed that six H-bonds are mainly formed by Glu29, Ser30, Lys32, and Ala177 of G-alpha with Bipolaroxin. In the beta subunit, the residues of the core beta strand domain participate in the ligand interaction where Lys256, Phe306, and Leu352 formed seven H-bonds with the ligand Bipolaroxin. All-atoms molecular dynamics (MD) simulation studies were conducted for G-alpha and -beta subunit and Bipolaroxin complexes to explore the stability, conformational flexibility, and dynamic behavior of the complex system. In planta studies clearly indicated that application of Bipolaroxin significantly impacted the physio-biochemical pathways in wheat and led to the blightening of leaves in susceptible cultivars as compared to resistant ones. Further, it interacted with the Gα and Gβ subunits of G-protein, phenylpropanoid, and MAPK pathways, which is clearly supported by the qPCR results. This study gives deeper insights into understanding the molecular dialogues between Bipolaroxin and the Gα and Gβ subunits of the wheat heterotrimeric G-protein during host–pathogen interaction. MDPI 2022-09-05 /pmc/articles/PMC9495435/ /pubmed/36139828 http://dx.doi.org/10.3390/antiox11091754 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Malviya, Deepti Singh, Udai B. Dehury, Budheswar Singh, Prakash Kumar, Manoj Singh, Shailendra Chaurasia, Anurag Yadav, Manoj Kumar Shankar, Raja Roy, Manish Rai, Jai P. Mukherjee, Arup K. Solanki, Ishwar Singh Kumar, Arun Kumar, Sunil Singh, Harsh V. Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title | Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title_full | Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title_fullStr | Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title_full_unstemmed | Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title_short | Novel Insights into Understanding the Molecular Dialogues between Bipolaroxin and the Gα and Gβ Subunits of the Wheat Heterotrimeric G-Protein during Host–Pathogen Interaction |
title_sort | novel insights into understanding the molecular dialogues between bipolaroxin and the gα and gβ subunits of the wheat heterotrimeric g-protein during host–pathogen interaction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9495435/ https://www.ncbi.nlm.nih.gov/pubmed/36139828 http://dx.doi.org/10.3390/antiox11091754 |
work_keys_str_mv | AT malviyadeepti novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT singhudaib novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT dehurybudheswar novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT singhprakash novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT kumarmanoj novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT singhshailendra novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT chaurasiaanurag novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT yadavmanojkumar novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT shankarraja novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT roymanish novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT raijaip novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT mukherjeearupk novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT solankiishwarsingh novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT kumararun novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT kumarsunil novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction AT singhharshv novelinsightsintounderstandingthemoleculardialoguesbetweenbipolaroxinandthegaandgbsubunitsofthewheatheterotrimericgproteinduringhostpathogeninteraction |