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Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma
BACKGROUND: For patients with stage T1-T2 esophageal squamous cell carcinoma (ESCC), accurately predicting lymph node metastasis (LNM) remains challenging. We aimed to investigate the performance of machine learning (ML) models for predicting LNM in patients with stage T1-T2 ESCC. METHODS: Patients...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9496653/ https://www.ncbi.nlm.nih.gov/pubmed/36158684 http://dx.doi.org/10.3389/fonc.2022.986358 |
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author | Li, Dong-lin Zhang, Lin Yan, Hao-ji Zheng, Yin-bin Guo, Xiao-guang Tang, Sheng-jie Hu, Hai-yang Yan, Hang Qin, Chao Zhang, Jun Guo, Hai-yang Zhou, Hai-ning Tian, Dong |
author_facet | Li, Dong-lin Zhang, Lin Yan, Hao-ji Zheng, Yin-bin Guo, Xiao-guang Tang, Sheng-jie Hu, Hai-yang Yan, Hang Qin, Chao Zhang, Jun Guo, Hai-yang Zhou, Hai-ning Tian, Dong |
author_sort | Li, Dong-lin |
collection | PubMed |
description | BACKGROUND: For patients with stage T1-T2 esophageal squamous cell carcinoma (ESCC), accurately predicting lymph node metastasis (LNM) remains challenging. We aimed to investigate the performance of machine learning (ML) models for predicting LNM in patients with stage T1-T2 ESCC. METHODS: Patients with T1-T2 ESCC at three centers between January 2014 and December 2019 were included in this retrospective study and divided into training and external test sets. All patients underwent esophagectomy and were pathologically examined to determine the LNM status. Thirty-six ML models were developed using six modeling algorithms and six feature selection techniques. The optimal model was determined by the bootstrap method. An external test set was used to further assess the model’s generalizability and effectiveness. To evaluate prediction performance, the area under the receiver operating characteristic curve (AUC) was applied. RESULTS: Of the 1097 included patients, 294 (26.8%) had LNM. The ML models based on clinical features showed good predictive performance for LNM status, with a median bootstrapped AUC of 0.659 (range: 0.592, 0.715). The optimal model using the naive Bayes algorithm with feature selection by determination coefficient had the highest AUC of 0.715 (95% CI: 0.671, 0.763). In the external test set, the optimal ML model achieved an AUC of 0.752 (95% CI: 0.674, 0.829), which was superior to that of T stage (0.624, 95% CI: 0.547, 0.701). CONCLUSIONS: ML models provide good LNM prediction value for stage T1-T2 ESCC patients, and the naive Bayes algorithm with feature selection by determination coefficient performed best. |
format | Online Article Text |
id | pubmed-9496653 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94966532022-09-23 Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma Li, Dong-lin Zhang, Lin Yan, Hao-ji Zheng, Yin-bin Guo, Xiao-guang Tang, Sheng-jie Hu, Hai-yang Yan, Hang Qin, Chao Zhang, Jun Guo, Hai-yang Zhou, Hai-ning Tian, Dong Front Oncol Oncology BACKGROUND: For patients with stage T1-T2 esophageal squamous cell carcinoma (ESCC), accurately predicting lymph node metastasis (LNM) remains challenging. We aimed to investigate the performance of machine learning (ML) models for predicting LNM in patients with stage T1-T2 ESCC. METHODS: Patients with T1-T2 ESCC at three centers between January 2014 and December 2019 were included in this retrospective study and divided into training and external test sets. All patients underwent esophagectomy and were pathologically examined to determine the LNM status. Thirty-six ML models were developed using six modeling algorithms and six feature selection techniques. The optimal model was determined by the bootstrap method. An external test set was used to further assess the model’s generalizability and effectiveness. To evaluate prediction performance, the area under the receiver operating characteristic curve (AUC) was applied. RESULTS: Of the 1097 included patients, 294 (26.8%) had LNM. The ML models based on clinical features showed good predictive performance for LNM status, with a median bootstrapped AUC of 0.659 (range: 0.592, 0.715). The optimal model using the naive Bayes algorithm with feature selection by determination coefficient had the highest AUC of 0.715 (95% CI: 0.671, 0.763). In the external test set, the optimal ML model achieved an AUC of 0.752 (95% CI: 0.674, 0.829), which was superior to that of T stage (0.624, 95% CI: 0.547, 0.701). CONCLUSIONS: ML models provide good LNM prediction value for stage T1-T2 ESCC patients, and the naive Bayes algorithm with feature selection by determination coefficient performed best. Frontiers Media S.A. 2022-09-08 /pmc/articles/PMC9496653/ /pubmed/36158684 http://dx.doi.org/10.3389/fonc.2022.986358 Text en Copyright © 2022 Li, Zhang, Yan, Zheng, Guo, Tang, Hu, Yan, Qin, Zhang, Guo, Zhou and Tian https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Li, Dong-lin Zhang, Lin Yan, Hao-ji Zheng, Yin-bin Guo, Xiao-guang Tang, Sheng-jie Hu, Hai-yang Yan, Hang Qin, Chao Zhang, Jun Guo, Hai-yang Zhou, Hai-ning Tian, Dong Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title | Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title_full | Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title_fullStr | Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title_full_unstemmed | Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title_short | Machine learning models predict lymph node metastasis in patients with stage T1-T2 esophageal squamous cell carcinoma |
title_sort | machine learning models predict lymph node metastasis in patients with stage t1-t2 esophageal squamous cell carcinoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9496653/ https://www.ncbi.nlm.nih.gov/pubmed/36158684 http://dx.doi.org/10.3389/fonc.2022.986358 |
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