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A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics

We report an analysis of the distribution of lengths of plant DNA (exons). Three species of Cucurbitaceae were investigated. In our study, we used two distinct [Formula: see text] distribution functions, namely, [Formula: see text]-Maxwellian and double- [Formula: see text] , to fit the length distr...

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Detalles Bibliográficos
Autores principales: de Lima, Maxsuel M. F., Anselmo, Dory H. A. L., Silva, Raimundo, Nunes, Glauber H. S., Fulco, Umberto L., Vasconcelos, Manoel S., Mello, Vamberto D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9497530/
https://www.ncbi.nlm.nih.gov/pubmed/36141111
http://dx.doi.org/10.3390/e24091225
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author de Lima, Maxsuel M. F.
Anselmo, Dory H. A. L.
Silva, Raimundo
Nunes, Glauber H. S.
Fulco, Umberto L.
Vasconcelos, Manoel S.
Mello, Vamberto D.
author_facet de Lima, Maxsuel M. F.
Anselmo, Dory H. A. L.
Silva, Raimundo
Nunes, Glauber H. S.
Fulco, Umberto L.
Vasconcelos, Manoel S.
Mello, Vamberto D.
author_sort de Lima, Maxsuel M. F.
collection PubMed
description We report an analysis of the distribution of lengths of plant DNA (exons). Three species of Cucurbitaceae were investigated. In our study, we used two distinct [Formula: see text] distribution functions, namely, [Formula: see text]-Maxwellian and double- [Formula: see text] , to fit the length distributions. To determine which distribution has the best fitting, we made a Bayesian analysis of the models. Furthermore, we filtered the data, removing outliers, through a box plot analysis. Our findings show that the sum of [Formula: see text]-exponentials is the most appropriate to adjust the distribution curves and that the values of the [Formula: see text] parameter do not undergo considerable changes after filtering. Furthermore, for the analyzed species, there is a tendency for the [Formula: see text] parameter to lay within the interval [Formula: see text].
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spelling pubmed-94975302022-09-23 A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics de Lima, Maxsuel M. F. Anselmo, Dory H. A. L. Silva, Raimundo Nunes, Glauber H. S. Fulco, Umberto L. Vasconcelos, Manoel S. Mello, Vamberto D. Entropy (Basel) Article We report an analysis of the distribution of lengths of plant DNA (exons). Three species of Cucurbitaceae were investigated. In our study, we used two distinct [Formula: see text] distribution functions, namely, [Formula: see text]-Maxwellian and double- [Formula: see text] , to fit the length distributions. To determine which distribution has the best fitting, we made a Bayesian analysis of the models. Furthermore, we filtered the data, removing outliers, through a box plot analysis. Our findings show that the sum of [Formula: see text]-exponentials is the most appropriate to adjust the distribution curves and that the values of the [Formula: see text] parameter do not undergo considerable changes after filtering. Furthermore, for the analyzed species, there is a tendency for the [Formula: see text] parameter to lay within the interval [Formula: see text]. MDPI 2022-09-01 /pmc/articles/PMC9497530/ /pubmed/36141111 http://dx.doi.org/10.3390/e24091225 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
de Lima, Maxsuel M. F.
Anselmo, Dory H. A. L.
Silva, Raimundo
Nunes, Glauber H. S.
Fulco, Umberto L.
Vasconcelos, Manoel S.
Mello, Vamberto D.
A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title_full A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title_fullStr A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title_full_unstemmed A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title_short A Bayesian Analysis of Plant DNA Length Distribution via κ-Statistics
title_sort bayesian analysis of plant dna length distribution via κ-statistics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9497530/
https://www.ncbi.nlm.nih.gov/pubmed/36141111
http://dx.doi.org/10.3390/e24091225
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