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Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes
Male infertility is a global health problem that affects a large number of couples worldwide. It can be categorized into specific subtypes, including teratozoospermia. The present study aimed to identify new variants associated with teratozoospermia in the Greek population and to explore the role of...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9498395/ https://www.ncbi.nlm.nih.gov/pubmed/36140773 http://dx.doi.org/10.3390/genes13091606 |
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author | Kyrgiafini, Maria-Anna Giannoulis, Themistoklis Chatziparasidou, Alexia Christoforidis, Nikolaos Mamuris, Zissis |
author_facet | Kyrgiafini, Maria-Anna Giannoulis, Themistoklis Chatziparasidou, Alexia Christoforidis, Nikolaos Mamuris, Zissis |
author_sort | Kyrgiafini, Maria-Anna |
collection | PubMed |
description | Male infertility is a global health problem that affects a large number of couples worldwide. It can be categorized into specific subtypes, including teratozoospermia. The present study aimed to identify new variants associated with teratozoospermia in the Greek population and to explore the role of genes on which these were identified. For this reason, whole-genome sequencing (WGS) was performed on normozoospermic and teratozoospermic individuals, and after selecting only variants found in teratozoospermic men, these were further prioritized using a wide range of tools, functional and predictive algorithms, etc. An average of 600,000 variants were identified, and of them, 61 were characterized as high impact and 153 as moderate impact. Many of these are mapped in genes previously associated with male infertility, yet others are related for the first time to teratozoospermia. Furthermore, pathway enrichment analysis and Gene ontology (GO) analyses revealed the important role of the extracellular matrix in teratozoospermia. Therefore, the present study confirms the contribution of genes studied in the past to male infertility and sheds light on new molecular mechanisms by providing a list of variants and candidate genes associated with teratozoospermia in the Greek population. |
format | Online Article Text |
id | pubmed-9498395 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94983952022-09-23 Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes Kyrgiafini, Maria-Anna Giannoulis, Themistoklis Chatziparasidou, Alexia Christoforidis, Nikolaos Mamuris, Zissis Genes (Basel) Article Male infertility is a global health problem that affects a large number of couples worldwide. It can be categorized into specific subtypes, including teratozoospermia. The present study aimed to identify new variants associated with teratozoospermia in the Greek population and to explore the role of genes on which these were identified. For this reason, whole-genome sequencing (WGS) was performed on normozoospermic and teratozoospermic individuals, and after selecting only variants found in teratozoospermic men, these were further prioritized using a wide range of tools, functional and predictive algorithms, etc. An average of 600,000 variants were identified, and of them, 61 were characterized as high impact and 153 as moderate impact. Many of these are mapped in genes previously associated with male infertility, yet others are related for the first time to teratozoospermia. Furthermore, pathway enrichment analysis and Gene ontology (GO) analyses revealed the important role of the extracellular matrix in teratozoospermia. Therefore, the present study confirms the contribution of genes studied in the past to male infertility and sheds light on new molecular mechanisms by providing a list of variants and candidate genes associated with teratozoospermia in the Greek population. MDPI 2022-09-08 /pmc/articles/PMC9498395/ /pubmed/36140773 http://dx.doi.org/10.3390/genes13091606 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kyrgiafini, Maria-Anna Giannoulis, Themistoklis Chatziparasidou, Alexia Christoforidis, Nikolaos Mamuris, Zissis Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title | Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title_full | Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title_fullStr | Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title_full_unstemmed | Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title_short | Whole-Genome Profile of Greek Patients with Teratozοοspermia: Identification of Candidate Variants and Genes |
title_sort | whole-genome profile of greek patients with teratozοοspermia: identification of candidate variants and genes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9498395/ https://www.ncbi.nlm.nih.gov/pubmed/36140773 http://dx.doi.org/10.3390/genes13091606 |
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