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Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning
Clinical guidelines recommend several risk factors to identify women in early pregnancy at high risk of developing pregnancy-associated hypertension. However, these variables result in low predictive accuracy. Here, we developed a prediction model for pregnancy-associated hypertension using graph-ba...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9499925/ https://www.ncbi.nlm.nih.gov/pubmed/36138035 http://dx.doi.org/10.1038/s41598-022-15391-4 |
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author | Lee, Seung Mi Nam, Yonghyun Choi, Eun Saem Jung, Young Mi Sriram, Vivek Leiby, Jacob S. Koo, Ja Nam Oh, Ig Hwan Kim, Byoung Jae Kim, Sun Min Kim, Sang Youn Kim, Gyoung Min Joo, Sae Kyung Shin, Sue Norwitz, Errol R. Park, Chan-Wook Jun, Jong Kwan Kim, Won Kim, Dokyoon Park, Joong Shin |
author_facet | Lee, Seung Mi Nam, Yonghyun Choi, Eun Saem Jung, Young Mi Sriram, Vivek Leiby, Jacob S. Koo, Ja Nam Oh, Ig Hwan Kim, Byoung Jae Kim, Sun Min Kim, Sang Youn Kim, Gyoung Min Joo, Sae Kyung Shin, Sue Norwitz, Errol R. Park, Chan-Wook Jun, Jong Kwan Kim, Won Kim, Dokyoon Park, Joong Shin |
author_sort | Lee, Seung Mi |
collection | PubMed |
description | Clinical guidelines recommend several risk factors to identify women in early pregnancy at high risk of developing pregnancy-associated hypertension. However, these variables result in low predictive accuracy. Here, we developed a prediction model for pregnancy-associated hypertension using graph-based semi-supervised learning. This is a secondary analysis of a prospective study of healthy pregnant women. To develop the prediction model, we compared the prediction performances across five machine learning methods (semi-supervised learning with both labeled and unlabeled data, semi-supervised learning with labeled data only, logistic regression, support vector machine, and random forest) using three different variable sets: [a] variables from clinical guidelines, [b] selected important variables from the feature selection, and [c] all routine variables. Additionally, the proposed prediction model was compared with placental growth factor, a predictive biomarker for pregnancy-associated hypertension. The study population consisted of 1404 women, including 1347 women with complete follow-up (labeled data) and 57 women with incomplete follow-up (unlabeled data). Among the 1347 with complete follow-up, 2.4% (33/1347) developed pregnancy-associated HTN. Graph-based semi-supervised learning using top 11 variables achieved the best average prediction performance (mean area under the curve (AUC) of 0.89 in training set and 0.81 in test set), with higher sensitivity (72.7% vs 45.5% in test set) and similar specificity (80.0% vs 80.5% in test set) compared to risk factors from clinical guidelines. In addition, our proposed model with graph-based SSL had a higher performance than that of placental growth factor for total study population (AUC, 0.71 vs. 0.80, p < 0.001). In conclusion, we could accurately predict the development pregnancy-associated hypertension in early pregnancy through the use of routine clinical variables with the help of graph-based SSL. |
format | Online Article Text |
id | pubmed-9499925 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-94999252022-09-24 Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning Lee, Seung Mi Nam, Yonghyun Choi, Eun Saem Jung, Young Mi Sriram, Vivek Leiby, Jacob S. Koo, Ja Nam Oh, Ig Hwan Kim, Byoung Jae Kim, Sun Min Kim, Sang Youn Kim, Gyoung Min Joo, Sae Kyung Shin, Sue Norwitz, Errol R. Park, Chan-Wook Jun, Jong Kwan Kim, Won Kim, Dokyoon Park, Joong Shin Sci Rep Article Clinical guidelines recommend several risk factors to identify women in early pregnancy at high risk of developing pregnancy-associated hypertension. However, these variables result in low predictive accuracy. Here, we developed a prediction model for pregnancy-associated hypertension using graph-based semi-supervised learning. This is a secondary analysis of a prospective study of healthy pregnant women. To develop the prediction model, we compared the prediction performances across five machine learning methods (semi-supervised learning with both labeled and unlabeled data, semi-supervised learning with labeled data only, logistic regression, support vector machine, and random forest) using three different variable sets: [a] variables from clinical guidelines, [b] selected important variables from the feature selection, and [c] all routine variables. Additionally, the proposed prediction model was compared with placental growth factor, a predictive biomarker for pregnancy-associated hypertension. The study population consisted of 1404 women, including 1347 women with complete follow-up (labeled data) and 57 women with incomplete follow-up (unlabeled data). Among the 1347 with complete follow-up, 2.4% (33/1347) developed pregnancy-associated HTN. Graph-based semi-supervised learning using top 11 variables achieved the best average prediction performance (mean area under the curve (AUC) of 0.89 in training set and 0.81 in test set), with higher sensitivity (72.7% vs 45.5% in test set) and similar specificity (80.0% vs 80.5% in test set) compared to risk factors from clinical guidelines. In addition, our proposed model with graph-based SSL had a higher performance than that of placental growth factor for total study population (AUC, 0.71 vs. 0.80, p < 0.001). In conclusion, we could accurately predict the development pregnancy-associated hypertension in early pregnancy through the use of routine clinical variables with the help of graph-based SSL. Nature Publishing Group UK 2022-09-22 /pmc/articles/PMC9499925/ /pubmed/36138035 http://dx.doi.org/10.1038/s41598-022-15391-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lee, Seung Mi Nam, Yonghyun Choi, Eun Saem Jung, Young Mi Sriram, Vivek Leiby, Jacob S. Koo, Ja Nam Oh, Ig Hwan Kim, Byoung Jae Kim, Sun Min Kim, Sang Youn Kim, Gyoung Min Joo, Sae Kyung Shin, Sue Norwitz, Errol R. Park, Chan-Wook Jun, Jong Kwan Kim, Won Kim, Dokyoon Park, Joong Shin Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title | Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title_full | Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title_fullStr | Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title_full_unstemmed | Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title_short | Development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
title_sort | development of early prediction model for pregnancy-associated hypertension with graph-based semi-supervised learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9499925/ https://www.ncbi.nlm.nih.gov/pubmed/36138035 http://dx.doi.org/10.1038/s41598-022-15391-4 |
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