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Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods

Corona disease has become one of the problems and challenges of humankind over the past two years. One of the problems that existed from the first days of this epidemic was clinical symptoms similar to other infectious viruses such as colds and influenza. Therefore, diagnosis of this disease and its...

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Autores principales: Khodaei, Amin, Shams, Parvaneh, Sharifi, Hadi, Mozaffari-Tazehkand, Behzad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9500098/
https://www.ncbi.nlm.nih.gov/pubmed/36168586
http://dx.doi.org/10.1016/j.bspc.2022.104192
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author Khodaei, Amin
Shams, Parvaneh
Sharifi, Hadi
Mozaffari-Tazehkand, Behzad
author_facet Khodaei, Amin
Shams, Parvaneh
Sharifi, Hadi
Mozaffari-Tazehkand, Behzad
author_sort Khodaei, Amin
collection PubMed
description Corona disease has become one of the problems and challenges of humankind over the past two years. One of the problems that existed from the first days of this epidemic was clinical symptoms similar to other infectious viruses such as colds and influenza. Therefore, diagnosis of this disease and its coping and treatment approaches is also been difficult. In this study, Attempts has been made to investigate the origin of this disease and the genetic structure of the virus leading to it. For this purpose, signal processing and linear predictive coding approaches were used which are widely used in data compression. A pattern recognition model was presented for the detection and separation of covid samples from the influenza virus case studies. This model, which was based on support vector machine classifier, was tested successfully on several datasets collected from different countries. The obtained results performed on all datasets by more than 98% accuracy. The proposed model, in addition to its good performance accuracy, can be a step forward in quantifying and digitizing medical big data information.
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spelling pubmed-95000982022-09-23 Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods Khodaei, Amin Shams, Parvaneh Sharifi, Hadi Mozaffari-Tazehkand, Behzad Biomed Signal Process Control Article Corona disease has become one of the problems and challenges of humankind over the past two years. One of the problems that existed from the first days of this epidemic was clinical symptoms similar to other infectious viruses such as colds and influenza. Therefore, diagnosis of this disease and its coping and treatment approaches is also been difficult. In this study, Attempts has been made to investigate the origin of this disease and the genetic structure of the virus leading to it. For this purpose, signal processing and linear predictive coding approaches were used which are widely used in data compression. A pattern recognition model was presented for the detection and separation of covid samples from the influenza virus case studies. This model, which was based on support vector machine classifier, was tested successfully on several datasets collected from different countries. The obtained results performed on all datasets by more than 98% accuracy. The proposed model, in addition to its good performance accuracy, can be a step forward in quantifying and digitizing medical big data information. Elsevier Ltd. 2023-02 2022-09-23 /pmc/articles/PMC9500098/ /pubmed/36168586 http://dx.doi.org/10.1016/j.bspc.2022.104192 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Khodaei, Amin
Shams, Parvaneh
Sharifi, Hadi
Mozaffari-Tazehkand, Behzad
Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title_full Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title_fullStr Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title_full_unstemmed Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title_short Identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
title_sort identification and classification of coronavirus genomic signals based on linear predictive coding and machine learning methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9500098/
https://www.ncbi.nlm.nih.gov/pubmed/36168586
http://dx.doi.org/10.1016/j.bspc.2022.104192
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