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Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer
The groundbreaking research work about SIGLEC15 has raised it as a potential promising target in cancer immunotherapy. Unfortunately, the role of SIGLEC15 in thyroid carcinoma (THCA) remains obscure. Public and home multi-omics data were collected to investigate the role of SIGLEC15 in THCA in our s...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9500188/ https://www.ncbi.nlm.nih.gov/pubmed/36159823 http://dx.doi.org/10.3389/fimmu.2022.975787 |
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author | Hou, Xiaofeng Chen, Chao Lan, Xiabin He, Xiaodong |
author_facet | Hou, Xiaofeng Chen, Chao Lan, Xiabin He, Xiaodong |
author_sort | Hou, Xiaofeng |
collection | PubMed |
description | The groundbreaking research work about SIGLEC15 has raised it as a potential promising target in cancer immunotherapy. Unfortunately, the role of SIGLEC15 in thyroid carcinoma (THCA) remains obscure. Public and home multi-omics data were collected to investigate the role of SIGLEC15 in THCA in our study. SIGLEC15 was upregulated in THCA tumor tissue compared to nontumor tissue in both mRNA and protein levels; gene set enrichment analysis (GSEA) results showed that high SIGLEC15 mRNA expression was positively correlated to many immune pathways. Results of the examination of immunological landscape characteristics displayed high SIGLEC15 mRNA expression that mainly positively correlated with a large number of cancer immunity immunomodulators and pathways. In addition, upregulation of SIGLEC15 was positively correlated with an enhanced immune score, stromal score, and estimate score. However, higher SIGLEC15 mRNA also met high immune exhausted status. The majority of CpG methylation sites negatively correlated with SIGLEC15 mRNA expression. Analysis of clinical characteristics supported increased SIGLEC15 expression that was positively correlated with more extrathyroid extension and lymph node metastasis. We observed different single nucleotide variant (SNV) and copy number variation (CNV) patterns in high and low SIGLEC15 mRNA expression subgroups; some vital DNA damage repair deficiency scores addressed a negative correlation with SIGLEC15 mRNA expression. We also found that some commonly used chemotherapy drugs might be suitable for different SIGLEC15 mRNA expression subgroups. This study highlighted the vital role of SIGLEC15 in THCA. Targeting SIGLEC15 may offer a potential novel therapeutic opportunity for THCA patients. However, the detailed exact cellular mechanisms of SIGLEC15 in THCA still needed to be elucidated by further studies. |
format | Online Article Text |
id | pubmed-9500188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95001882022-09-24 Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer Hou, Xiaofeng Chen, Chao Lan, Xiabin He, Xiaodong Front Immunol Immunology The groundbreaking research work about SIGLEC15 has raised it as a potential promising target in cancer immunotherapy. Unfortunately, the role of SIGLEC15 in thyroid carcinoma (THCA) remains obscure. Public and home multi-omics data were collected to investigate the role of SIGLEC15 in THCA in our study. SIGLEC15 was upregulated in THCA tumor tissue compared to nontumor tissue in both mRNA and protein levels; gene set enrichment analysis (GSEA) results showed that high SIGLEC15 mRNA expression was positively correlated to many immune pathways. Results of the examination of immunological landscape characteristics displayed high SIGLEC15 mRNA expression that mainly positively correlated with a large number of cancer immunity immunomodulators and pathways. In addition, upregulation of SIGLEC15 was positively correlated with an enhanced immune score, stromal score, and estimate score. However, higher SIGLEC15 mRNA also met high immune exhausted status. The majority of CpG methylation sites negatively correlated with SIGLEC15 mRNA expression. Analysis of clinical characteristics supported increased SIGLEC15 expression that was positively correlated with more extrathyroid extension and lymph node metastasis. We observed different single nucleotide variant (SNV) and copy number variation (CNV) patterns in high and low SIGLEC15 mRNA expression subgroups; some vital DNA damage repair deficiency scores addressed a negative correlation with SIGLEC15 mRNA expression. We also found that some commonly used chemotherapy drugs might be suitable for different SIGLEC15 mRNA expression subgroups. This study highlighted the vital role of SIGLEC15 in THCA. Targeting SIGLEC15 may offer a potential novel therapeutic opportunity for THCA patients. However, the detailed exact cellular mechanisms of SIGLEC15 in THCA still needed to be elucidated by further studies. Frontiers Media S.A. 2022-09-09 /pmc/articles/PMC9500188/ /pubmed/36159823 http://dx.doi.org/10.3389/fimmu.2022.975787 Text en Copyright © 2022 Hou, Chen, Lan and He https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Hou, Xiaofeng Chen, Chao Lan, Xiabin He, Xiaodong Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title | Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title_full | Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title_fullStr | Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title_full_unstemmed | Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title_short | Unveiling the molecular features, relevant immune and clinical characteristics of SIGLEC15 in thyroid cancer |
title_sort | unveiling the molecular features, relevant immune and clinical characteristics of siglec15 in thyroid cancer |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9500188/ https://www.ncbi.nlm.nih.gov/pubmed/36159823 http://dx.doi.org/10.3389/fimmu.2022.975787 |
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