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A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family
bla(IMP) and bla(VIM) are the most detected plasmid-encoded carbapenemase genes in Pseudomonas aeruginosa. Previous studies have reported plasmid sequences carrying bla(IMP) variants, except bla(IMP-56). In this study, we aimed to characterize a plasmid carrying bla(IMP-56) in a P. aeruginosa strain...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9501424/ https://www.ncbi.nlm.nih.gov/pubmed/36144465 http://dx.doi.org/10.3390/microorganisms10091863 |
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author | Gómez-Martínez, Jessica Rocha-Gracia, Rosa del Carmen Bello-López, Elena Cevallos, Miguel Angel Castañeda-Lucio, Miguel López-García, Alma Sáenz, Yolanda Jiménez-Flores, Guadalupe Cortés-Cortés, Gerardo Lozano-Zarain, Patricia |
author_facet | Gómez-Martínez, Jessica Rocha-Gracia, Rosa del Carmen Bello-López, Elena Cevallos, Miguel Angel Castañeda-Lucio, Miguel López-García, Alma Sáenz, Yolanda Jiménez-Flores, Guadalupe Cortés-Cortés, Gerardo Lozano-Zarain, Patricia |
author_sort | Gómez-Martínez, Jessica |
collection | PubMed |
description | bla(IMP) and bla(VIM) are the most detected plasmid-encoded carbapenemase genes in Pseudomonas aeruginosa. Previous studies have reported plasmid sequences carrying bla(IMP) variants, except bla(IMP-56). In this study, we aimed to characterize a plasmid carrying bla(IMP-56) in a P. aeruginosa strain isolated from a Mexican hospital. The whole genome of P. aeruginosa strain PE52 was sequenced using Illumina Miseq 2 × 150 bp, with 5 million paired-end reads. We characterized a 27 kb plasmid (pPE52IMP) that carried bla(IMP-56). The phylogenetic analysis of RepA in pPE52IMP and 33 P. aeruginosa plasmids carrying resistance genes reported in the GenBank revealed that pPE52IMP and four plasmids (pMATVIM-7, unnamed (FDAARGOS_570), pD5170990, and pMRVIM0713) were in the same clade. These closely related plasmids belonged to the MOB(P11) subfamily and had similar backbones. Another plasmid (p4130-KPC) had a similar backbone to pPE52IMP; however, its RepA was truncated. In these plasmids, the resistance genes bla(KPC-2), bla(VIM) variants, aac(6′)-Ib4, bla(OXA) variants, and bla(IMP-56) were inserted between phd and resolvase genes. This study describes a new family of plasmids carrying resistance genes, with a similar backbone, the same RepA, and belonging to the MOB(P11) subfamily in P. aeruginosa. In addition, our characterized plasmid harboring bla(IMP-56) (pPE52IMP) belongs to this family. |
format | Online Article Text |
id | pubmed-9501424 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95014242022-09-24 A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family Gómez-Martínez, Jessica Rocha-Gracia, Rosa del Carmen Bello-López, Elena Cevallos, Miguel Angel Castañeda-Lucio, Miguel López-García, Alma Sáenz, Yolanda Jiménez-Flores, Guadalupe Cortés-Cortés, Gerardo Lozano-Zarain, Patricia Microorganisms Article bla(IMP) and bla(VIM) are the most detected plasmid-encoded carbapenemase genes in Pseudomonas aeruginosa. Previous studies have reported plasmid sequences carrying bla(IMP) variants, except bla(IMP-56). In this study, we aimed to characterize a plasmid carrying bla(IMP-56) in a P. aeruginosa strain isolated from a Mexican hospital. The whole genome of P. aeruginosa strain PE52 was sequenced using Illumina Miseq 2 × 150 bp, with 5 million paired-end reads. We characterized a 27 kb plasmid (pPE52IMP) that carried bla(IMP-56). The phylogenetic analysis of RepA in pPE52IMP and 33 P. aeruginosa plasmids carrying resistance genes reported in the GenBank revealed that pPE52IMP and four plasmids (pMATVIM-7, unnamed (FDAARGOS_570), pD5170990, and pMRVIM0713) were in the same clade. These closely related plasmids belonged to the MOB(P11) subfamily and had similar backbones. Another plasmid (p4130-KPC) had a similar backbone to pPE52IMP; however, its RepA was truncated. In these plasmids, the resistance genes bla(KPC-2), bla(VIM) variants, aac(6′)-Ib4, bla(OXA) variants, and bla(IMP-56) were inserted between phd and resolvase genes. This study describes a new family of plasmids carrying resistance genes, with a similar backbone, the same RepA, and belonging to the MOB(P11) subfamily in P. aeruginosa. In addition, our characterized plasmid harboring bla(IMP-56) (pPE52IMP) belongs to this family. MDPI 2022-09-17 /pmc/articles/PMC9501424/ /pubmed/36144465 http://dx.doi.org/10.3390/microorganisms10091863 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gómez-Martínez, Jessica Rocha-Gracia, Rosa del Carmen Bello-López, Elena Cevallos, Miguel Angel Castañeda-Lucio, Miguel López-García, Alma Sáenz, Yolanda Jiménez-Flores, Guadalupe Cortés-Cortés, Gerardo Lozano-Zarain, Patricia A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title | A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title_full | A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title_fullStr | A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title_full_unstemmed | A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title_short | A Plasmid Carrying bla(IMP-56) in Pseudomonas aeruginosa Belonging to a Novel Resistance Plasmid Family |
title_sort | plasmid carrying bla(imp-56) in pseudomonas aeruginosa belonging to a novel resistance plasmid family |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9501424/ https://www.ncbi.nlm.nih.gov/pubmed/36144465 http://dx.doi.org/10.3390/microorganisms10091863 |
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